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  3. RAFL02-10-I13

RAFL02-10-I13

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda00046)

full reading [+] show sequence

Nucleotide sequence: RAFL02-10-I13 - full reading 
AAACCCTTAA GCTAAGCAAA TTTCAAAGCA TTTCAAAAAC CCTAGCCTAT 
CTCTCTTTAT CTCTCACAAC AAAATCTTTG AAATGGCGAT CTCTAAGGCT 
TCCATTGTTG TTCTCATGAT GGTGATTATC TCCGTCGTTG CATCGGCACA 
ATCTGAGGCA CCAGCACCAA GTCCTACTTC TGGATCTAGT GCGATCTCAG 
CGTCTTTCGT GTCAGCTGGA GTTGCAGCAG TCGCGGCTCT TGTTTTTGGC 
TCAGCTCTTC GGATCTAAGT TACTGTGATG GTGATTTCGT ACAGAGATTG 
TTTTTGCGGT ATAGGCCATT CATCATTATT CGTCGTCTCG TGTGTATTCC 
GAAGCAGCTT ATAGATCTCA TTTTCTATTT GTCCCTCTTC TTCTTCGTTT 
TCTATCTTAA TCTTCATATC TGTATGAGGA TATTACTATT TCTTTTTAGA 
GTATTTGTGG TTTTGTGATT TTCTAGACGA TTTCTTAGTT ATGCGATATG 
GTTTTTGATA TGATATGAAT CTTATTCTAT TT

Gene models with high sequence identity

  1. AT5G11740.1 [+] show detail - arabinogalactan protein 15
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT5G11740.1

Model type
Protein coding
Short Description
arabinogalactan protein 15
Curator Summary
Encodes arabinogalactan protein (AGP15).
Computational Description
arabinogalactan protein 15 (AGP15); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL02-10-I13 introduced

  • F00414 - seed::increased size / seed::increased length
  • F01224 - seed::increased length
  • F09004 - Specific phenotypes were NOT observed.
  • F13148 - seed::increased size / seed::increased length
  • F15906 - seed::increased size / seed::increased length
  • F15915 - Specific phenotypes were NOT observed.
  • F21930 - Specific phenotypes were NOT observed.
  • F23545 - Specific phenotypes were NOT observed.
  • F24803 - Specific phenotypes were NOT observed.
  • F25834 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

10 mutant lines found