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  3. RAFL03-04-A04

RAFL03-04-A04

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda00179)

full reading [+] show sequence

Nucleotide sequence: RAFL03-04-A04 - full reading 
CCAAAATAAA AATCATGGCG AGACTTTTCG TCTCTATCCC TATGCAACCC 
ACACAAATAA GCTTCCCTGC GTCTTCTTCT CAGCCACTAT TATCTCCGCC 
GGCGAACAAT TTCACCGATG GTGGAGCTGG GGGATTATGT CTTACACGGA 
GAATCAGAGA CAGTTCCGTG GTGACGCGAG CAGGGCCTAG TACGAGCAGC 
TACTTGCTCG CGTTCGCCAT TCCTGCTACT CTTATCGCCG CCACTGTCTT 
CACTTCAATC AAAATCGCTG ACAAACTCGA CGAAGATTTC CTTGAGGATA 
TTGCGTTGAA CCAAGCGATA AAAGCAGCAG AAAAGGGAGA GAATGGAGAA 
GGTGATATCT CACTGGACGA TGTGATTCAA GAACCTGTGC TTCAACGAAC 
ACGTAACCGG CCTAAACGTG AAGTTTAAAA ACGCACACAC AGCTTCTTCA 
TGATGGGAAT AGACGTTGTA ACTGTAATAC ATGTTGTGTT TTGTATAAGA 
AAATTTAAGC GTGTAGCCTT TCCTAGTCCC GTTTATAGTT GTAGTTACTG 
GTTTTACATT ACCGTTTGAT CATTTTGTAA AGAAAAAACG GATGATGAAT 
CAAAAACCTC ATTACAGTTG AAAAAAAAAA AAAAAACTCG AGG

Gene models with high sequence identity

  1. AT4G31560.1 [+] show detail - high chlorophyll fluorescence 153
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT4G31560.1

Model type
Protein coding
Short Description
high chlorophyll fluorescence 153
Curator Summary
Encodes HCF153, a 15-KDa protein involved in the biogenesis of the cytochrome b(6)f complex. Associated with the thylakoid membrane.
Computational Description
high chlorophyll fluorescence 153 (HCF153); Has 29 Blast hits to 29 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL03-04-A04 introduced

  • F17808 - seed::increased size / seed::increased length

Mutant lines with disrupted or induced

5 mutant lines found