1. Home
  2. Full-length cDNAs
  3. RAFL04-09-A20

RAFL04-09-A20

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda00224)

full reading [+] show sequence

Nucleotide sequence: RAFL04-09-A20 - full reading 
AGGTTTGTCT TCAAAATCGT CAGAAGAAGA AGAAGAAGTC AAAGACGATA 
ACAATGACGT CATCATCGTA CCTCCGATTT GCGATCGCCG TCGTAGCTTT 
CCTCTCAATC ACCACCATCA CCACCGCACG TCCTTGCAAA ACCTTCCTAA 
TCTCCTCATA TTCCCTCTCA ATAACCCCAG AAAACCCTAA CCTCGAATCC 
GATTTCACCT CCACACGATT CGTCACCGTT TTCACAATCC GTCGTCTAAA 
TCCTCACCAC GTGGTTCCTT TCTTCGTCAA TCGTCGTCAC GAGAAGCCAC 
AGATCCAATC GGATCGTTCC CTCCCTTTGA TCTCTGATAA CATCAATTCG 
TTTAGAGATC GAACCAGAGA TATTCTTAGC GTCGTCGTCG CGCTTTTGTT 
CGGTGTTGGT TGTGGTGCTT TAACCGCTGC TACTATGTAT CTTGTTTGGG 
CTCTTGTTGT GAATCGTCAA AGCTATGATT TTGAGGAAGA AGAAGATGAT 
TATGAGAATG ATGAATCTGA TGCTGCTAGC TTGAAGAAAT TGGGTTATGT 
TAAGATTCCA GCTCCAGCTC CTGCTCCTGT GAAGGAAGCT GCTTGATTTG 
AGGTTGTGAA TTTCAGTTTC TGCATATTAT CATGATTTAC GTTGTTGCTT 
ATCTATGTTG TTGCGTACAA GTAAATTCGT CTCTGTTATG GATTTATCTA 
AACTTACTAT ACTCTAAGTA TCAGTGTTTT TACGATTTGT AGTTGATGTT 
TCTTAGATAA AC

Gene models with high sequence identity

  1. AT1G65720.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT1G65720.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 44 Blast hits to 44 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL04-09-A20 introduced

Mutant lines with disrupted or induced

2 mutant lines found