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  3. RAFL04-09-I24

RAFL04-09-I24

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda02290)

full reading [+] show sequence

Nucleotide sequence: RAFL04-09-I24 - full reading 
TGGAGAAATG TCAGAGATAG AAGAAGAAGA AGAAGAAGGA TCAGCAAGTG 
CAATTACAGG TTCGAGAAGT TTCGATCTTC CCGATGAACT TCTTCAAGTT 
CTACCGTCCG ATCCATTCGA GCAGCTAGAT GTAGCTCGCA AAATCACATC 
CATTGCTCTC TCGACACGTG TCTCAGCTCT CGAATCAGAG TCGTCGGATC 
TCCGGGAACT TCTCGCCGAG AAAGAAAAAG AATTTGAAGA ACTCCAGTCT 
CACGTTGAGT CTCTCGAGGC TTCTCTTTCC GATGCGTTTC ATAAGCTTTC 
TCTCGCTGAT GGTGAAAAGG AGAATCTGAT AAGAGAAAAT GCTTCTTTGT 
CTAATACTGT CAAGAGACTT CAGAGAGATG TCTCAAAGCT TGAGGGTTTT 
AGGAAGACGC TTATGATGTC TCTTCAAGAT GATGACCAAA ATGCAGGAAC 
AACGCAAATC ATCGCTAAGC CGACACCAAA CGATGATGAT ACTCCATTTC 
AACCTTCAAG ACATTCATCA ATCCAATCTC AACAAGCTTC TGAAGCCATT 
GAACCAGCTG CAACTGACAA CGAAAACGAT GCTCCTAAAC CAAGTTTATC 
AGCTAGTCTT CCGTTAGTAT CACAAACTAC TACGCCACGG CTTACTCCTC 
CTGGTTCTCC ACCAATCTTA TCTGCTTCTG GTACACCGAA AACAACTTCG 
AGACCTATCT CTCCTCGACG CCATTCTGTA TCGTTCGCTA CCACTAGAGG 
CATGTTTGAT GATACTAGAT CTTCTATTTC AATCTCAGAG CCTGGTTCAC 
AAACTGCGAG AACTCGGGTT GATGGAAAAG AGTTCTTTCG ACAAGTCAGG 
AGCCGATTAT CTTACGAGCA ATTTGGTGCA TTTCTTGGAA ATGTGAAGGA 
TCTTAACGCC CACAAGCAAA CAAGAGAAGA AACACTTAGG AAAGCTGAAG 
AGATATTTGG AGGCGATAAC AGAGATCTCT ACGTCATATT CGAGGGCTTG 
ATCACACGCA ACGCTCACTA AGAGTTTGGC TTCTTCAGTT ACACAAAGAA 
CTTATATACT CGGAAACTCA GGATTCATCA GTCTGCAACA TTCAATTTCT 
TTTGTTTCCT TGGCTGTCAA GTAAGACCAA GTAAAACTGA CAATTTGATT 
GTATCATTTG TGCTCTCTCG TGTATCTATC TATCTCTCTC TTCTTGAATA 
AATTACATTT CATC

Gene models with high sequence identity

  1. AT4G15545.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16520.1); ...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

Program Description E-value
Coil coiled-coil 0
Coil coiled-coil 0

See the detailed result >

AT4G15545.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL04-09-I24 introduced

  • F09020 - Specific phenotypes were NOT observed.
  • F12114 - seed::increased size / seed::increased length
  • F13826 - Specific phenotypes were NOT observed.
  • F18118 - seed::increased size / seed::increased length
  • F20135 - Specific phenotypes were NOT observed.
  • F22209 - Specific phenotypes were NOT observed.
  • F23442 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

7 mutant lines found