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Full-length cDNAs
RAFL04-12-M19

RAFL04-12-M19

RIKEN Arabidopsis Full-length cDNAs

AAGCTTCCCT CTCTCTTCGA GTCGGTTCTT AATCTCCGGG ATAAAATGGC 
GACCGAGGAC GTGAAGCTGA TCGGCTCATG GGCGAGTGTT TACGTCATGA 
GGGCGAGGAT CGCTCTCCAC CTCAAATCTA TTAGCTACGA ATTCCTTCAG 
GAGACGTATG GTTCAAAGAG CGAATTGCTC CTCAAATCAA ACCCGGTTCA 
CAAGAAGATG CCGGTTCTGA TTCACGCTGA CAAACCGGTG TGCGAGTCCA 
ACATCATCGT TCATTATATC GACGAGGCTT GGAACTCTTC TGGACCTTCC 
ATTCTCCCGT CCCATCCATA CGACCGGGCC ATTGCTCGGT TTTGGGCTGC 
CTACATAGAC GATCAGGTTC ATAGATTGTT CTTCACTTGC TCTTTTCACT 
TTGATTGCAT GTAATAAAGT ATACCGGGAA TTAATGAGGG ATTGATTTGG 
TTTTGATTGC TTTAATTTTG ATACATCCCC AAAACTTTAG CGGTTCTTTT 
ATGATTGTTA TTGGTTTAAT CCGGTTAGTA ATCTAGAATA ACACGATATG 
ACCGATTTAA ACCGGATAGG GTTTGACTAT AGTCCAGCTT CGACTAACTT 
TAATTTCTAG TTTATACGGA TAGTTAGGTA ATTAGTCAAC TTTTATGTTG 
AAAGAAATTA GACATTTTGT TTATCTTCCT TACTATATAT GACATAATCA 
AGTAAATCTT AAATCTTATA TGTTCTGACT TAAATTTGAT ATGAATGGAA 
GTGGTTTATC TCTGTGAGAA GTATCCTAAC AGCTCAAGGA GACGAAGAGA 
AGAAAGCAGC CATAGCTCAA GTTGAAGAAA GGACCAAGCT TCTGGAGAAA 
GCATTCAACG ATTGTAGCCA AGGAAAACCG TTCTTCAACG GTGACCATAT 
CGGTTACCTC GACATTGCCT TGGGGAGCTT CTTAGGTTGG TGGAGAGTCG 
TCGAGTTGGA TGCCAATCAT AAATTTCTTG ATGAGACCAA AACTCCCTCT 
CTAGTCAAAT GGGCAGAGCG GTTCTGTGAT GATCCCGCTG TGAAACCTAT 
AATGCCCGAG ATTACAAAGC TCGCTGAATT CGCAAGGAAG CTCTTTCCTA 
AGCGGCAAGC ATAAACTGGA TTACTAGGAT GTAAGTTATA TAATAAGCAC 
AGCCAAATAT TTTTTTTATG TCTTTTGCAT ATTCGTTCAT AATCTTGGAG 
TTATGAAAAT ATTGTAATCC ATATTACCTC AGATCAAATT TTACATGAGT 
GTACCAAACA TATAAACATT GATTATCGAA AAAAAAAAAA AAAA

Gene models with high sequence identity

AT1G10360.1 [+] show detail - glutathione S-transferase TAU 18
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Glutathione S-transferase, N-terminal	3.3e-11
HMMPfam	Glutathione S-transferase, C-terminal	3.3e-08
HMMPanther	GLUTATHIONE S-TRANSFERASE	1.6e-39
HMMPanther	GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY,	1.6e-39
HMMPanther	GLUTATHIONE S-TRANSFERASE	6.1e-68
HMMPanther	GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY,	6.1e-68
Gene3D	Thioredoxin fold	3e-24
Gene3D	Glutathione S-transferase, C-terminal-like	1.7e-27
ProfileScan	Glutathione S-transferase, N-terminal	19.692
ProfileScan	Glutathione S-transferase/chloride channel, C-terminal	13.625
superfamily	Thioredoxin-like fold	2.8e-20
superfamily	Glutathione S-transferase, C-terminal-like	1.6e-08
superfamily	Glutathione S-transferase, C-terminal-like	5e-28

See the detailed result >

AT1G10360.1

Model type: Protein coding
Short Description: glutathione S-transferase TAU 18
Curator Summary: Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
Computational Description: glutathione S-transferase TAU 18 (GSTU18); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT1G10370.1); Has 5056 Blast hits to 5041 proteins in 1030 species: Archae - 0; Bacteria - 2429; Metazoa - 208; Fungi - 116; Plants - 1907; Viruses - 0; Other Eukaryotes - 396 (source: NCBI BLink).
Link: InterPro Scan - TAIR

Mutant lines with RAFL04-12-M19 introduced

F27148 - Specific phenotypes were NOT observed.
F30315 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

6 mutant lines found