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RAFL04-16-B20

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda00574)

full reading [+] show sequence

Nucleotide sequence: RAFL04-16-B20 - full reading 
ACCATTCAAA TTGATTGAGT TTGTTATACA AAAAAAAAAG AGAAGAAGAA 
GCCAGAAGTC TGAGAGTTTT ATAAGTAACG AAAATGAAAT CGACCGTCAT 
GATGATTTTC CTCATTATCT ACCTCCTCAT CGCCGTGCCT TGCTTCGCTA 
AAGGATCGGA GCAAACGGAT TCAGAGGTGT ACGAGATCGA TTACAGGGGA 
CCAGAGACTC ATAACTCTAG ACCTCCACCG GAAACTATGC ACGGCAAGCC 
ACCGTACATC CACCATAATA CCTCCGCCGC TGGGCTCGGT GCTCATGTAG 
GAGGAAAGAA CTAGAGAGAG AGCGAGACCT TTTCCAAGGA GAAGACTCAG 
AAGTTGAAGA GGAAGATTAC GAGAGTTGTG ATATATATAT GAGTAATTAA 
TGATGTTAAT TGATACAAAT TTATACTTTA ATTATTTATC ATATGAAGAT 
GATCATCGAT GTGTGATCAG TACAGTTAGT GTGAATAACA CACTACTCTC 
CTGATGTCAT GTCCGGTCTT TTATTTATTT CATTTTTCAA TTCTCATGCA 
CCGTTCTCTA TATCATTTTT TTCG

Gene models with high sequence identity

  1. AT5G03120.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT5G03120.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 14 Blast hits to 14 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL04-16-B20 introduced

  • F20118 - seed::increased size / seed::increased length
  • F26709 - Specific phenotypes were NOT observed.
  • F29144 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

4 mutant lines found