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RAFL04-16-K24

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda00636)

full reading [+] show sequence

Nucleotide sequence: RAFL04-16-K24 - full reading 
AAGACTTGTG GTTTCTCCTT CCTTGGAGTT CACAGAGAAT TGGGATTTAT 
CCTCCCTTGG CCGGTTTCTA TGTGGCCTTC CACATCACCT AGATTCACCA 
TCACCACACC TTATCCACAC CCACGCGCCG CCTCTTCTTT CTTACAGGTG 
AAAGCTTTCC AACGCGGCGA CTTTGACCGT TTGGCTGATA ACGTTAAGTC 
AGGTAAAGCA TGGAGAGACG CGTGGAGAAG CGCTAACGAT GGATTCGAGC 
AATTCGTTTT TGAGGCTAAG AAAACCGCTG AGCGAATTGA TCGCCAATAC 
GCTGTTTCTC GCCGCTTTAG CTCCGCTGCT AGCTCAGCCG CTGACCGTGC 
TCGTGAGATT GATCGTGAGT TTGGGATTAC TCCTCGTGTT AGGACTGTCT 
CTGCCGATTT CAGTAGAAAT TTCCCTAAGT ACAGGAAGCA ATTCAGTGCA 
TTCTTGAATA CACCGCTTGG TGGAAGTTTT GCTACTATTT TCTTCCTTTG 
GTTTGCTCTC TCTGGATGGC TGTTCCGAGT TATAATAATC GCCACTTGGG 
TTCTTCCAAT TGCTGGCCCT CTTCTCATTG GTGCAGTCGC CAACAACTTT 
GTCATCAAGG GAGAATGCCC AGCATGTAAG AGGCAGTTTA TAGGGTACAA 
GAACCAAATC ATCAGATGTG AGGGATGTGG GAACATAGTG TGGCAACCAC 
AAGGCGATTT CTTCTCAAAA GATGGCAACA ACAACAACAA CAATAATAAT 
AGCAAGGGAA ACTCTAAAAA GCCACCTAAG TCCCAAATCA TTGATGTCGA 
TTTTGAGGAG AAATGATTAT TAGAGACGAG AATGAAGCAG AAGGCTCTAT 
TGGTGCACTA ATATTCAAGT GAAGATAAAA ATATGTGTTT ATAGCTGAAT 
CGTTTACTGT TTTTGTCTGT TTTGAGCTGT AGCAATCGTG TTGCTTGTTG 
TGTACATGAT AAGGTTTCTT TGTAGACGAA CAAATCTAGT TTCCACAAGC 
CTAGAGACTT GATTGAAACT CTGAAAGTTC TTACATGTTA GACAAATCAT 
ATTATGAAAA CAATTTACAT C

Gene models with high sequence identity

  1. AT2G44870.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
    E-value: 0; Score: 99.91

 

InterPro Scan Digest

See the detailed result >

AT2G44870.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39 proteins in 18 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL04-16-K24 introduced

  • F12403 - rosette leaf::epinastic / rosette leaf::abnormal / whole plant::increased height / fruit::decreased length / stem::abnormal
  • F13627 - rosette leaf::desaturated green / rosette leaf::increased width / cauline leaf::decreased width / stem::abnormal / stem::present in fewer numbers in organism / rosette leaf::desaturated green / rosette leaf::increased width / cauline leaf::desaturated green / fruit::abnormal
  • F16042 - Specific phenotypes were NOT observed.
  • F21612 - Specific phenotypes were NOT observed.
  • F29402 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

5 mutant lines found