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Full-length cDNAs
RAFL04-19-D23

RAFL04-19-D23

RIKEN Arabidopsis Full-length cDNAs

AACATTGTCT TTTCGGGTTA ATTTCTTCTT CTTCTTCCTT TTCTTACTAA 
ATTCTCTTAG GTAGTTGTCG ATTCGATTTC TTTGTCTTCC TCTTCGCTTA 
TTTTCGTTGA ATCTCTTGTT TACACCTTTT CCTGAAAACA AAATTGTGTT 
TTTTGTAGGG TTTTAGTCAT ACTTAATGGC TTCCAATTCG GAGAAAAATC 
CTCTTCTTTC AGATGAGAAA CCCAAATCGA CGGAGGAGAA TAAGAGTTCT 
AAGCCGGAAT CAGCTTCTGG GAGTTCAACT TCATCAGCTA TGCCTGGCTT 
GAATTTCAAT GCTTTTGATT TCTCTAATAT GGCTAGTATT CTCAACGATC 
CTAGCATCAG AGAAATGGCT GAGCAAATAG CTAAAGATCC TGCGTTTAAC 
CAATTGGCTG AGCAGCTTCA GAGATCTATT CCTAACGCTG GCCAGGAAGG 
TGGTTTCCCT AACTTTGATC CTCAACAGTA TGTCAATACA ATGCAACAGG 
TTATGCATAA CCCTGAGTTT AAGACAATGG CCGAGAAACT TGGTACCGCC 
TTAGTTCAGG ATCCACAAAT GTCTCCTTTT TTGGATGCTT TCTCGAATCC 
TGAAACAGCA GAACACTTTA CTGAGCGTAT GGCGCGGATG AAAGAAGATC 
CAGAGTTGAA ACCTATACTA GATGAGATTG ATGCTGGTGG TCCTTCTGCC 
ATGATGAAGT ACTGGAATGA TCCAGAAGTG CTGAAAAAGC TGGGTGAAGC 
AATGGGTATG CCTGTTGCTG GCTTACCAGA CCAGACTGTT TCAGCTGAAC 
CTGAGGTAGC AGAAGAAGGT GAAGAAGAAG AGTCTATTGT TCACCAAACT 
GCCAGTCTTG GTGATGTTGA GGGTTTGAAA GCTGCCTTGG CATCTGGTGG 
TAACAAAGAT GAAGAAGATT CTGAAGGAAG GACAGCATTG CATTTTGCTT 
GTGGATACGG CGAGTTGAAA TGTGCTCAAG TTCTTATCGA TGCTGGAGCA 
AGTGTTAATG CGGTTGACAA AAACAAGAAC ACACCTCTGC ATTATGCTGC 
TGGTTACGGG AGGAAAGAGT GTGTAAGCCT TCTCCTGGAG AATGGTGCTG 
CAGTCACTCT GCAAAACCTA GACGAGAAGA CGCCAATTGA TGTAGCGAAG 
CTCAACAGCC AGCTGGAGGT GGTGAAGCTG CTTGAGAAGG ATGCTTTCCT 
TTGAGCTCTG CTGGTTAAAG GAAAGCTCTA AGCTCATATT GTCTTTGAGG 
CATTTGTCTT GTGTGTGTCC TGAACCAGTT TCACAGGCTT TTTGTGTACA 
CTTTTTATTA GTTCCTCTCT TCTTCTAAAT TTGTCTCTTA TGTTGTTTTA 
AAAGTCAATA AAGAAAGAAA TAGCAATCAA TGATTTAAT

Gene models with high sequence identity

AT4G35450.2 [+] show detail - ankyrin repeat-containing protein 2
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
ProfileScan	Ankyrin repeat	13.758
ProfileScan	Ankyrin repeat	12.529
ProfileScan	Ankyrin repeat-containing domain	34.349
HMMSmart	Ankyrin repeat	1300
HMMSmart	Ankyrin repeat	4.9e-05
HMMSmart	Ankyrin repeat	2.1e-05
superfamily	Ankyrin repeat-containing domain	3.9e-37
Gene3D	Ankyrin repeat-containing domain	8.6e-33
HMMPfam	Ankyrin repeat	3.2e-09
HMMPfam	Ankyrin repeat	3.6e-09
Coil	coiled-coil	0
HMMPanther	ANKYRIN REPEAT DOMAIN PROTEIN 2 (ATAKR2)	1.6e-51
HMMPanther	ANKYRIN REPEAT-CONTAINING	1.6e-51

See the detailed result >

AT4G35450.2

Model type: Protein coding
Short Description: ankyrin repeat-containing protein 2
Curator Summary: Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.
Computational Description: ankyrin repeat-containing protein 2 (AKR2); INVOLVED IN: in 6 processes; LOCATED IN: integral to chloroplast outer membrane, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1); Has 85365 Blast hits to 29004 proteins in 1328 species: Archae - 144; Bacteria - 6951; Metazoa - 44906; Fungi - 6142; Plants - 3755; Viruses - 871; Other Eukaryotes - 22596 (source: NCBI BLink).
Link: InterPro Scan - TAIR

Mutant lines with RAFL04-19-D23 introduced

F07205 - Specific phenotypes were NOT observed.
F07340 - Specific phenotypes were NOT observed.
F12931 - Specific phenotypes were NOT observed.
F15522 - Specific phenotypes were NOT observed.
F16811 - Specific phenotypes were NOT observed.
F19528 - rosette leaf::abnormal
F19817 - Specific phenotypes were NOT observed.
F19915 - Specific phenotypes were NOT observed.
F22002 - Specific phenotypes were NOT observed.
F28727 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

18 mutant lines found