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  3. RAFL05-01-M12

RAFL05-01-M12

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda00734)

full reading [+] show sequence

Nucleotide sequence: RAFL05-01-M12 - full reading 
ACTGTCTACA AAATCATTGA AGATCTACCC AAAAAAAAAA AAAAAAGAGA 
TGGTTCTGCT AGAGAAGCTT TGGGATGATG TTGTGGCTGG ACCTCAGCCT 
GACCGTGGCC TTGGCCGCCT CCGTAAGATC ACCACCCAAC CCATTAATAT 
CCGAGATATA GGAGAAGGGA GCAGCAGTAA GGTGGTGATG CATAGGTCGT 
TGACCATGCC GGCGGCAGTG AGCCCTGGAA CTCCAACGAC TCCAACCACT 
CCGACGACGC CACGTAAGGA TAACGTGTGG AGGAGCGTCT TTAATCCGGG 
AAGCAACCTC GCCACTAGAG CCATCGGCTC CAACATCTTT GATAAACCCA 
CCCATCCAAA TTCTCCCTCC GTCTACGACT GGTTGTACAG CGGTGACTCA 
AGGAGTCAGC ACCGTTAGGG ATGGTCCGAT GGAGTGTGAC ATGCGGGTGA 
TGTAAATATG GTGACCTGAT CTTCCGCCAC CTTACTTTGT TTTTTTTATA 
TTGTTTTTGT GTACTTTATC AGAGTGGATA AAGTGACGGG GAATGTTTTT 
CTTTTGTACA AAAAACTGTC TTCCCACCTA AGCAATGTGT GTTAGTTTCT 
GTTTTGGGCT GTGTTTTGCA AGTTTTTGTA TTTCAGAGTT GTGTAGTGTA 
GTTGCAAGTG GCGGTTGGAT CTTTCACTAT CTTGTTGGAT TTTGATGATG 
GTTGATGCTT TTGCTTTAAT GTTAAATAAA TAAGCATACT TTTGCT

Gene models with high sequence identity

  1. AT1G28330.1 [+] show detail - dormancy-associated protein-like 1
    E-value: 0; Score: 99.87

 

InterPro Scan Digest

See the detailed result >

AT1G28330.1

Model type
Protein coding
Short Description
dormancy-associated protein-like 1
Curator Summary
dormancy-associated protein (DRM1)
Computational Description
dormancy-associated protein-like 1 (DYL1); CONTAINS InterPro DOMAIN/s: Dormancyauxin associated (InterPro:IPR008406); BEST Arabidopsis thaliana protein match is: Dormancy/auxin associated family protein (TAIR:AT2G33830.2); Has 226 Blast hits to 226 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 225; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL05-01-M12 introduced

  • F18011 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

3 mutant lines found