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RAFL05-01-O08

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda00878)

full reading [+] show sequence

Nucleotide sequence: RAFL05-01-O08 - full reading
TCCGGAGGAG CGACCAATAA GAGCGCGAGG AGCTTCCACG TGTTACTACA 
CGAATCTTGT TTAGTAAAAA GCGCAGCTGC AAAAAAAATC GAGTAGAGAA
GAAGTAGGCA GACAAAGAAG AAGAAGAAGA AGTTCTCGGC GTGCTTCAAT
GGCGATATCA GTAGCAGCTT CGTCCTCTAT GGCCGTGATG GTTCCACGTG
TTCCCGCCGT ATCCACCCGT TGCTCCGCCG TCCCTTATCT TCCTCCTCGC
TCCTTTGGCC GATCCTCTTT CACCGTTCCG TTGAAGCTTG TTTCAGGGAA
TGGATTGCAA AAAGTTGAAT TGTTGAAGAC AAGAGCTTCT TCAGAAGAGA
CCTCGTCCAT TGATACCAAC GAACTCATCA CAGATTTGAA GGAAAAGTGG
GATGGTCTTG AGAACAAATC TACTGTACTT ATATATGGAG GAGGAGCCAT
TGTTGCTGTT TGGTTATCTT CCATTGTTGT TGGTGCCATC AACTCTGTTC
CTCTGCTTCC GAAAGTTATG GAACTTGTCG GTCTCGGGTA CACTGGATGG
TTTGTCTACA GATACCTTCT CTTCAAGTCA AGCAGAAAGG AATTGGCTGA
GGATATTGAA TCCTTGAAGA AGAAGATCGC AGGAAGCGAA TAGATTCATT
TTCAAATAAA ACCAGCTTTC TCTCTGTATG TTTTCCTGTA ATATCGTGTT
ATATTATACA ATGTCTCTGT TTCAACATTG TATCTGTTGC ATCTGAAACT
ATTATCTTGG ATCCG

Gene models with high sequence identity

  1. AT4G01150.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT4G01150.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL05-01-O08 introduced

  • F12935 - Specific phenotypes were NOT observed.
  • F19747 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

10 mutant lines found