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RAFL05-01-O08

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda00878)

full reading [+] show sequence

Nucleotide sequence: RAFL05-01-O08 - full reading 
TCCGGAGGAG CGACCAATAA GAGCGCGAGG AGCTTCCACG TGTTACTACA 
CGAATCTTGT TTAGTAAAAA GCGCAGCTGC AAAAAAAATC GAGTAGAGAA 
GAAGTAGGCA GACAAAGAAG AAGAAGAAGA AGTTCTCGGC GTGCTTCAAT 
GGCGATATCA GTAGCAGCTT CGTCCTCTAT GGCCGTGATG GTTCCACGTG 
TTCCCGCCGT ATCCACCCGT TGCTCCGCCG TCCCTTATCT TCCTCCTCGC 
TCCTTTGGCC GATCCTCTTT CACCGTTCCG TTGAAGCTTG TTTCAGGGAA 
TGGATTGCAA AAAGTTGAAT TGTTGAAGAC AAGAGCTTCT TCAGAAGAGA 
CCTCGTCCAT TGATACCAAC GAACTCATCA CAGATTTGAA GGAAAAGTGG 
GATGGTCTTG AGAACAAATC TACTGTACTT ATATATGGAG GAGGAGCCAT 
TGTTGCTGTT TGGTTATCTT CCATTGTTGT TGGTGCCATC AACTCTGTTC 
CTCTGCTTCC GAAAGTTATG GAACTTGTCG GTCTCGGGTA CACTGGATGG 
TTTGTCTACA GATACCTTCT CTTCAAGTCA AGCAGAAAGG AATTGGCTGA 
GGATATTGAA TCCTTGAAGA AGAAGATCGC AGGAAGCGAA TAGATTCATT 
TTCAAATAAA ACCAGCTTTC TCTCTGTATG TTTTCCTGTA ATATCGTGTT 
ATATTATACA ATGTCTCTGT TTCAACATTG TATCTGTTGC ATCTGAAACT 
ATTATCTTGG ATCCG

Gene models with high sequence identity

  1. AT4G01150.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT4G01150.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL05-01-O08 introduced

  • F12935 - Specific phenotypes were NOT observed.
  • F19747 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

10 mutant lines found