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RAFL05-02-P20

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda17013)

full reading [+] show sequence

Nucleotide sequence: RAFL05-02-P20 - full reading 
CCCGATCACG CTATTCTCAA ACAAGCAAAG AACCTTAACC AAAAAGAAAA 
CGTCTACGGA GACATATGGA GAGGAAACAT CACTTCGTGT TAGTTCACAA 
CGCTTATCAT GGAGCCTGGA TCTGGTACAA GCTCAAGCCC CTCCTTGAAT 
CAGCCGGCCA CCGCGTTACT GCTGTCGAAC TCGCCGCCTC CGGGATCGAC 
CCACGACCAA TCCAGGCCGT TGAAACCGTC GACGAATACT CCAAACCGTT 
GATCGAAACC CTCAAATCTC TTCCAGAGAA CGAAGAGGTA ATTCTGGTTG 
GATTCAGCTT CGGAGGCATC AACATCGCTC TCGCCGCCGA CATATTTCCG 
GCGAAGATTA AGGTTCTTGT GTTCCTCAAC GCCTTCTTGC CCGACACAAC 
CCACGTGCCT TCTCACGTTC TGGACAAGTA TATGGAGATG CCTGGAGGTT 
TGGGAGATTG TGAGTTTTCA TCTCATGAAA CAAGAAATGG GACGATGAGT 
TTATTGAAGA TGGGACCAAA ATTCATGAAG GCACGTCTTT ACCAAAATTG 
TCCCATAGAG GATTACGAGC TGGCAAAAAT GTTGCATAGG CAAGGGTCAT 
TTTTCACAGA GGATCTATCA AAGAAAGAAA AGTTTAGCGA GGAAGGATAT 
GGTTCGGTGC AACGAGTTTA CGTAATGAGT AGTGAAGACA AAGCCATCCC 
CTGCGATTTC ATTCGTTGGA TGATTGATAA TTTCAACGTC TCGAAAGTCT 
ACGAGATCGA TGGCGGAGAT CACATGGTGA TGCTCTCCAA ACCCCAAAAA 
CTCTTTGACT CTCTCTCTGC TATTGCCACC GATTATATGT AATAATCTTA 
AGTCCGTTTT ACTTTTTTCT CATCGTTACT AATAAAACAA ACCCCTTTTT 
CCGGGAAAAA AAAAA

Gene models with high sequence identity

  1. AT5G10300.1 [+] show detail - methyl esterase 5
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

Program Description E-value
superfamily alpha/beta-Hydrolases 2.9e-55
Gene3D no description 1.5e-81
HMMPfam Alpha/beta hydrolase fold-1 9.6e-07
HMMPanther ALPHA/BETA HYDROLASE RELATED 4.9e-12

See the detailed result >

AT5G10300.1

Model type
Protein coding
Short Description
methyl esterase 5
Curator Summary
Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.
Computational Description
methyl esterase 5 (MES5); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 1 (TAIR:AT2G23620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL05-02-P20 introduced

  • F24025 - Specific phenotypes were NOT observed.
  • F28737 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

5 mutant lines found