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RAFL05-07-O05

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda01080)

full reading [+] show sequence

Nucleotide sequence: RAFL05-07-O05 - full reading 
AAAAGAGAGA AAGAAAAAAA AGCTCAAAGA ACTCAGAAGA AGAAGAAAGA 
TGTATCATCA AGAACAACAT CCTGTCGGTG CTCCTCCTCC CCAAGGGTAT 
CCACCTAAGG ACGGTTATCC TCCGGCCGGT TATCCTCCAG CCGGTTATCC 
ACCGCCAGGA TATGCTCAGG GATACCCTGC ACAAGGTTAT CCTCCGCCGC 
AGTACTCTCA AGCTCCGCAG CAGAAGCAAA ACGCCGGTAT GCTTGAAGGA 
TGTTTGGCTG CGCTCTGTTG TTGCTGTCTC TTGGATGCAT GTTTCTGATC 
GGAGGATAAT TATATACGTT GCCTCAGTCA ACTTTTATTT CCTCATATAT 
GTTATGTAAT GTTCAACAAT CTTTCTTCTG TTGTTATCTT CTTTCAAAAA 
AAAAAAAAAA A

Gene models with high sequence identity

  1. AT5G67600.1 [+] show detail - unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT5G67600.1

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL05-07-O05 introduced

  • F13814 - seed::increased size / seed::increased length

Mutant lines with disrupted or induced

2 mutant lines found