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RAFL05-14-I02

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda02596)

full reading [+] show sequence

Nucleotide sequence: RAFL05-14-I02 - full reading 
AAAAACGCAA ACGTACAAGT AGTGAAGTAT CACGACTTTG ATTTATTTCT 
GTATATCTAA GATGCAGGCG GTATCAGTTG ATGAAACCAA AAACACGGTG 
GTGCTACGGG CGGAGCACAA GAATGAAGAA GGCCGGAAAT CTGTTGATAA 
GTTCGAAGTG AAGACACGTA ATCCGGAGAC GATCAAGAGC GTTGAGCGGA 
AGCTTATGGA GAAAGGTGTT CAACGGATGG ATCGTCATCC TTCCGATGGG 
ATTCCTCTCA GGCGACCACC ATCGAAGTCA GGTCACGGCG GGAAGTACAC 
GTGGGAAGGA CCTGATCGGA TGGAGGATTA CGAGATGCAG CCGGATCCAC 
CGGCGATGGA TGAAGGAGAT CCTAATTACG ACGAGGAACA GGTGAAGAAG 
AGTGGTGATG ACGTGGCGGT TGAGCTTGTG AAAGGAGAGG TTGAGGTGGC 
TAAGGAGGCT CCGGCTGGTG TTGCTAGGGT TGAGGTTGAT CCTCGCTTGG 
TCGGTCGTTG AGAGTTTGAT AGAGGAGGAA GAAAAATGTT GGGGCGAATG 
TGAGAAAGAG GGAGAAATGT GGGGTTGGAT TTTTAATTTC GAGTTAATGT 
TTTAGTGTAA AATGACTTTT CACTATTTCT GTAAAAAATA ATAATTGATC 
TGCTAAC

Gene models with high sequence identity

  1. AT3G10020.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative str...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT3G10020.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 47 Blast hits to 47 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL05-14-I02 introduced

  • F00733 - Specific phenotypes were NOT observed.
  • F03213 - Specific phenotypes were NOT observed.
  • F16844 - rosette leaf::decreased size / rosette leaf::abnormal / rosette leaf::abnormal / whole plant::decreased height / sporophyte vegetative stage::decreased speed / seed::present in fewer numbers in organism
  • F16938 - Specific phenotypes were NOT observed.
  • F26220 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

6 mutant lines found