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RAFL05-14-J18

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda02602)

full reading [+] show sequence

Nucleotide sequence: RAFL05-14-J18 - full reading 
ACGAAAAAAG GAAATAGAAA AAAAAAGAAG AGAACAAATC TTTTTGATCT 
GTGCGTATGG TTGTTGTGTC TCTTCTTCCT CGAATCTCGA TCGTTACATC 
ACCGGGTTCT AGCCTTCACG ATGTGCTTTT GAGCATGAGA TTTGGTTTGA 
CGCGACATCT CCCTCTCAAA CGATCTTTCT CCAATTATTC AATCACTTCC 
GTATCTCCAG AACAACAGCT CAAATCTCCG GTGACCATGG CGACGACCGA 
GAGCAAGAAT CTTGTAGAAG CTTCCAAGGA GGAGACAAAC AAGAAGGAGA 
CAGAAGATAA GAAGGAGGTG GGAGTTTCGG TTCCTCCACC GCCAGAGAAA 
CCAGAGCCTG GCGATTGTTG CGGTAGCGGT TGCGTCCGAT GCGTTTGGGA 
TGTTTATTAC GATGAGCTCG AAGATTACAA CAAGCAGCTT TCTGGAGAAA 
CTAAATCAAT TTGACTGATT TTTCCTCGCA TTGTTAATGG AGAAATTAAA 
CATTTGTCTT TGTCGATTTG ATGATACAGT GCTTTTGTTG AACAAC

Gene models with high sequence identity

  1. AT5G17280.1 [+] show detail - CONTAINS InterPro DOMAIN/s: Oxidoreductase-like, N-terminal (InterPro:IPR019180); Has 1807 Blast ...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT5G17280.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Oxidoreductase-like, N-terminal (InterPro:IPR019180); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL05-14-J18 introduced

  • F16747 - rosette leaf::decreased size / rosette leaf::increased width / rosette leaf::present in fewer numbers in organism / stem::increased thickness / cauline leaf::present in fewer numbers in organism / stem::decreased thickness / fruit::abnormal

Mutant lines with disrupted or induced

1 mutant line founds