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RAFL05-14-L06

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda07311)

full reading [+] show sequence

Nucleotide sequence: RAFL05-14-L06 - full reading 
TATTGCGCGG CATCTCTCTC GTCTTCCTTT ACTCCGTCAA AACCATGTTT 
CTAAGTCAGT GCCGGAGCTG TAAACCTTTG CTCGAGTCTC GTATACCTTT 
GCTCCGCCTC TCTCTCTCTA AATGTCTCGA TCAGTCCTTC AAAACCACGG 
CTAGTAGCGA ATACGGTAGT AAGATCCCTG ATGCTCTTCT GGGACATCGA 
AGACTGGAAG ATCATAAGGC AAGCGTCTTC TGGGACGTGG AGGACTACAA 
GATCCCTGAT GGTCTCAGTG CTGGTGAGGT TTCGAAGAAC ATCAATACGG 
CTTTTGCGAA AATGGGATAT CCTGGTACGG TCTCAATCAA GGCTTATGCT 
GATGAGACGA ATCAGAGGAT CCAGGATAAG GAGTTTCACT CCGCCGGTAT 
CGAGCTCAAG CGCGTACCAG AAGGCTTGAA AGGAAAGGAT CATTCGAGAG 
ATATAGCTGT TTTAACTGGC ATGGGGGTGT GGATTACTGT CAATCGTGAT 
GTATCATCAT CGATAATGCT AATCTCAGAT AGCATCTACG GTTTTGCTGT 
AGACGAGTTT AAGAAGGTGA ATCATTATGT TCTTTGGAAA AAACTATCAG 
CTAAGGGCAA GCCTATCGCC CAGACCAGAA GATACTCTAA ACGTTGAGAC 
CAGATATACT TGGTTCTCTC CATGCTAATT GTTGGGTTTT GAATAAGTCA 
ATCACTAAGT CAAGTCTTAG CTTGTTTTTA GGAACTGATT GAGTTTTCTT 
GTTTTGAGTT TGTTTCGTTT TTCAGTTCCG TTTCTTATTC CTTAGTTTTC 
GTATTCACGT TGTAAGGCTC TTATAAAAGC CAATTTCAGT CTAATGAATT 
AAACACGAAT CATTCAGC

Gene models with high sequence identity

  1. AT3G62460.1 [+] show detail - Putative endonuclease or glycosyl hydrolase
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT3G62460.1

Model type
Protein coding
Short Description
Putative endonuclease or glycosyl hydrolase
Computational Description
Putative endonuclease or glycosyl hydrolase; BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT3G62210.1); Has 141 Blast hits to 133 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL05-14-L06 introduced

  • F00427 - Specific phenotypes were NOT observed.
  • F19031 - Specific phenotypes were NOT observed.
  • F27402 - rosette leaf::decreased size / rosette leaf::abnormal / rosette leaf::abnormal / cauline leaf::abnormal / whole plant::decreased height / sporophyte vegetative stage::decreased speed / fruit::decreased length / stem::present in fewer numbers in organism / rosette leaf::increased width / cauline leaf::decreased size / stem::present in fewer numbers in organism

Mutant lines with disrupted or induced

9 mutant lines found