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RAFL05-16-I03

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda07357)

full reading [+] show sequence

Nucleotide sequence: RAFL05-16-I03 - full reading 
GATGACATAC CAAAAGCAAT ACCAAATGCA AACACACCAC ATGCAGCAAC 
AACAACTCCA TCACTTCGTC TTTGTCCACG GCTCATGTCA TGGAGCATGG 
TGCTGGTTCA AACTAGCTGC AAAGCTCAAG CTCGATGGTC ACCGTGTGAC 
AGCTATCGAC CTTGGTGGCT CCGGTGTCGA CACGAGGCAG CTCCATGAGG 
TTCGTTTGGT GTCGGCGTAT CTAGAGCCTT TGATGAGTTT CATGGAGTCT 
CTCCCTGAAA ACGAGAAAGT GGTTCTTGTT GGTCATAGCT ATGGTGGCAT 
TGGAACTTCT CTTGCTATGG AAAGGTTTCC GACCAAAGTC TCTGTCGGAA 
TCTTCCTCTC TGCTTACATG CCGCACCATG ACTCTCCTCC GGCGGTTTTG 
ATTCAAGAGT ATTTTACGAG ACTACCAGAG GGTTTCGCTA TGGACTGTGA 
GTTTACATTC GAGGAAGGAT TAGAACACCC ACCAAGTTCA GTTTTGTTCG 
GTACTAGTTT CTTGAAGGAG AAGGCATATA GTAATTGCCA GTTAGAGGAT 
CTAGAATTAG CCATGGCGTT GATGAAACCA AGCTGGTTAT ACACTAAGGA 
AATGGGAGGT GAAGATCTGA TAACAAAGGA GAGGTATGGA TCTGGGAAGA 
GAGTGTTTAT TGTCTGTGAA GGCGACAATG TGGTTCCAGA GGAGATTCAG 
AAGTGGATGA TTAGTAACTA CGAGCCTCAC GAAGTTAAGC GGATTGAAGA 
AGCTGGTCAC ATGGCTATGC TCACTAAGCC TCATGAACTT TCTCAACTGC 
TACAAGAAAT AGCAGCGAAA TATAACTAAA TGTAAAATGA TGACACCTGT 
GTATGATTTG GGCTCAGTTA CATCTATGAT ATGAATAAGA GAGTTTCAAT 
AAAG

Gene models with high sequence identity

  1. AT3G50440.1 [+] show detail - methyl esterase 10
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

Program Description E-value
superfamily SSF53474 2.1e-55
HMMPfam Alpha/beta hydrolase fold-1 0.0019
HMMPanther PTHR10992 1.29999924468183e-15
Gene3D G3DSA:3.40.50.1820 2.70001369379003e-81

See the detailed result >

AT3G50440.1

Model type
Protein coding
Short Description
methyl esterase 10
Curator Summary
Encodes a protein shown to have methyl jasmonate esterase activity in vitro. This protein does not act on methyl IAA, MeSA, MeGA4, or MEGA9 in vitro.
Computational Description
methyl esterase 10 (MES10); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 1 (TAIR:AT2G23620.1); Has 1602 Blast hits to 1600 proteins in 360 species: Archae - 4; Bacteria - 838; Metazoa - 1; Fungi - 25; Plants - 612; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL05-16-I03 introduced

  • F11239 - Specific phenotypes were NOT observed.
  • F14545 - Specific phenotypes were NOT observed.
  • F18018 - Specific phenotypes were NOT observed.
  • F19927 - rosette leaf::present in greater numbers in organism / rosette leaf::abnormal / stem::decreased thickness / stem::abnormal

Mutant lines with disrupted or induced

4 mutant lines found