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  3. RAFL05-18-G08

RAFL05-18-G08

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda02757)

full reading [+] show sequence

Nucleotide sequence: RAFL05-18-G08 - full reading 
AAAAGCATTT GGTAGTCGTA ACCAAAACGC CAAATCATTA CCGTTCAACT 
GAAATCTAAC AGAGAGCCCT CTTTTCTTGG GAATTCGATT CCTTGTACGT 
TATCTTCTTC TTCTTCTTCT CTTTCTCAAA ATTCGTGTAT CTTCTGGGAA 
ATTTTCAGAT TTAGATGGAG AAAGGGGTTG GATTTGAGAA AGACATGAAG 
ACAGTCAGTG ATGGGTTTGT CGGAGGTTTT TTCCCTGTCT CTACCACCAA 
GATCGCGTGG AAATCAAGAA AAAGATCAGC ATTGTTGAAC CTAGACAAAG 
CACCGGAGGC TGTTACGGAG GTCACACCAG AGAAGAACGA GATAACAGCA 
ATGGATACCG AGAAAGTTGG GGAACCAATG ACCACAACTC CTCTTCTGTC 
CGAGAAAAGG AAAGCTCTGT TCGAGCCACT TGAACCCATT ACGAACTTGA 
ACGGAAAGCG ACCAACTGCG GCTGATTCAT TGTTGCCACC GCCGGATTTC 
GAGACTGCAA ACTACCCAAA AGGCTGGTTG ATCGGTAAGA AGAGGAAGCT 
TGTGAATGTT GATGTAGTTG AGAGCATGCG TAGAATAGCT GTCCAAGAAA 
TGAACAGAAA GGATCGAGAG ATAGATGGGT TAAACGAGCA GCTAGAAGAG 
GATTCACGGT GCTTAGAGCA TCTACAGCTT CAGCTGCTAC AAGAGAGAAG 
CAAGAGAACA GAGATTGAAA GAGAGAACAC AATGTTGAAA GAGCAAGTTG 
ATATGCTTGT GAACATGATA CAAGAAGATG ACGAAGAAGG AGCTGAAGAA 
CCCTAAGCTA GTTCTCATCA AATTTATGTC TCACCTATAA TAGCTGTGTT 
CTGTTTTTTT TATTCTTTTG TAGATTTGTC TCGTCCACAA AAAAGAAGAA 
AAGAAAGAAG CTTAACCATC TATTATTTGG TTAAGCTACT CTTGTTCCCT 
TGTGTGATAG AACAAAACAT AATCAAGAAC ATTATATATT CTAAGTAAAA 
AAAAAAAAAA AA

Gene models with high sequence identity

  1. AT1G80940.1 [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

Program Description E-value
HMMPanther PTHR22986:SF13 0.000309999945899369
HMMPanther PTHR22986 0.000309999945899369

See the detailed result >

AT1G80940.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL05-18-G08 introduced

  • F20303 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

6 mutant lines found