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  3. RAFL05-18-K13

RAFL05-18-K13

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda07413)

full reading [+] show sequence

Nucleotide sequence: RAFL05-18-K13 - full reading 
AAATCAAAAT GGTGGATGCG GCGGAGCAAC CACCTTCTAC CTCCGAGGGA 
GAAAGCCTCC TCAAGATCCA CATTGAGAGG ATGCATAAGA AGCTGAAGGA 
ACCACCACGG TTGCTCAGTT CGGCCGCCGG GAAACCTACT TGCTCCATCT 
TCCGGGTACC TCAGAGCATG ATTGATTGTA ATGGAAGATG CTATGAGCCA 
CGAGTGGTCT CGATTGGACC GTACCACCGT GGCCAAACAC AACTCAAAAT 
GATTGAAGAA CACAAATGGC GTTACCTAAA CGTTCTGCTC ACTAGAACCC 
AAAACCTAAC TCTAGAGGAT TACATGAAGA GCGTGAAGAA CGTTGAGGAA 
GTGGCGAGAG AATGTTACTC CGAGACAATC CACATGGACT CGGAAGAGTT 
CAACGAGATG ATGGTTCTTG ACGGTTGCTT TCTCCTTGAG CTGTTTCGCA 
AAGTGAACAA TCTTGTTCCT TTCGAACCAA ACGATCCACT TGTGGCCATG 
GCTTGGGTTC TTCCTTTCTT CTACAGAGAT TTTCTCTGTC TTGAGAATCA 
AATCCCTTTC TTCGTTCTAG AAACTTTGTT CAATCTCACA AGAGGAGACA 
ACGAAAACGA GACAAACGCT TCTTTACAAT CTCTAGCGTT TGCGTTTTTC 
AACAACATGA TGCACAGAAC AGAGGAAGAT CTCGCCAGGT TCAAAGAGCT 
AAGAGCCAAA CACCTCCTCG ACCTCCTCCG GTCAAGTTTC ATCCCGGAGA 
GTGAGCTTCA CACGCCGCCG GCAACGAATC CAGGGAAGGA AAAGATGCCG 
TCCCACATTA TCCACAGCAT TTCGAAGCTC CGGCGAGCCG GGATCAAACT 
CCGAGAGCTG AAAGACGCAG AGAGCTTCTT AGTGGTGAGA TTCAGACACG 
GGACCATCGA GATGCCGGCG ATCACCGTCG ACGATTTCAT GAGCAGTTTC 
TTAGAGAACT GCGTGGCATA CGAGCAATGC CACGTGGCGT GCTCAATGCA 
TTTCACGACA TACGCGACGC TCCTAGATTG TCTGACGAAT ACTTACAAGG 
ACGTTGAGTA TCTATGCGAC CAAAACATCA TAGAAAACTA TTTCGGAACA 
GATACAGAGC TGGCGAAATT CGTGAACAGT TTAGGCAGAG ATGTGGCGTT 
CGACATAACA CAGTGTTATC TCAAAGACTT GTTTGAAGAA GTGAATGAGT 
ATTACAAGAG TAGTTGGCAC GTGGAATGGG CTACTTTCAA ATTCACTTAC 
TTTAACTCTC CTTGGTCTTT TGTCTCTGCT CTTGCTGCTC TTGTTCTTTT 
GGTCTTGTCC GTTATCCAGA CTATTTACAC TGTTTTCCAG GCTTATCAAA 
AATAAATTTT TCAACCTTTT CATTATTAAA AAAAAAAAAA AAAAAAA

Gene models with high sequence identity

  1. AT2G36430.1 [+] show detail - Plant protein of unknown function (DUF247)
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT2G36430.1

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF247)
Computational Description
Plant protein of unknown function (DUF247); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G22550.2); Has 1137 Blast hits to 1027 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL05-18-K13 introduced

  • F12619 - Specific phenotypes were NOT observed.
  • F17907 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

5 mutant lines found