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RAFL05-21-B16

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda01382)

full reading [+] show sequence

Nucleotide sequence: RAFL05-21-B16 - full reading 
ATATTGTTTT CATTTGATAC ATATTCTCCC AAGTCAAATT TATATTTCAG 
AGAGGAAAAA GAAACAGACA CAAATCCCTC CAAGATGATG CATGACAGTA 
TGAAGTAGGT ATGAGCAAAG GAGTTGAGAT TTGAGAATAT TTGAGATTAC 
CTCTCTAATG GTAACTTCTA CGGTGGAGGC CTCGAGTCCT GAAGATGGCG 
AACGACTTAC TTTCACTAGA GACAGACACT ACGCCATGCA TGGTGAGATC 
TTGACGGTAG TTCTTGTCAT CAGCTTCGCC GTCTTCCTCT TGTTCCTCGT 
GTTGCTTCCT TGTCTGAAAC GCCGTTACAG TCACCAGTCC GACCTGTCAG 
AAGAGGCTTC CTGGAGCGGG ACACTCAAGC CCTCACCTGT TGTAAGCAAA 
CAATCCATTT CCACATAGCC ATAGGCCAAA TAACAAACAA ACATGTATTG 
AATATCTGTT ACAAAAGAGT ATCTGTTACA AATTGTAGAA GCGTCACTGT 
TCGTAAAAAA AAAAAAAAAA

Gene models with high sequence identity

  1. AT5G58570.1 [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT5G58570.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL05-21-B16 introduced

  • F11603 - stem::increased thickness / stem::abnormal / cauline leaf::epinastic / whole plant::increased height

Mutant lines with disrupted or induced

2 mutant lines found