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RAFL05-21-E09

RIKEN Arabidopsis Full-length cDNAs

Resource: (pdz87537)

5 prime EST [+] show sequence

Nucleotide sequence: RAFL05-21-E09 - 5 prime EST 
TTTGTTCAGA CGTTTCTTTA TTCTTCTTCC TTCCTTCTTC TCCTTCTTCT 
TGATCGTGTT CAGAAATCAT ATTCATCACC TCTCTCTCTC TATGTCTCTA 
TATTTGGATT CTTTATAACA TGTGAGATCG ATCTATTTTT GATCAGAGAC 
AGAGAGAAGA CTAGAAGAAG CAAAGAATAT TTCAAGAATG ATGAAGATGA 
ATACAGGAAC ATCGCCGTCG GTCATCGGCG GCGGGACTAG TGGTAATGAG 
TGGGAGTCTC GACCTGGAGG AATGGTTGTT CAACGTCGGA CAGATCAGAA 
CTCCGATGTG CCACGTGTCT TTCGTGTTCG GGTTAAATAC GGGTCGGTTT 
ATCACGAGAT CAACATCAAT TCCCAATCTT CCTTCGGAGA GTTGAAGAAG 
ATGTTGTCTG ATCAAGTGGG ACTTCACCAT GAAGACATGA AGGTTTTGTA 
CAAAGACAAA GAGAGAGATT CAAAGATGTT TCTTGATCTT TGTGGAGTTA 
AAGATCGGTC AAAGCTTGTT GTTAAAGAAG ATCCAATTTC TCAGGAGAAA 
CGTCTCCTTG CAAAAAGGAA AAACGCCGCC ATTGAAAAAG CTTCTAAATC 
TATCTCTGAT ATTAGTTTCG AAGTCGACAG ACTCGCCGGA CAGGT

Gene models with high sequence identity

  1. AT5G07220.1 [+] show detail - BCL-2-associated athanogene 3
    E-value: 0; Score: 100.00

3 prime EST [+] show sequence

Nucleotide sequence: RAFL05-21-E09 - 3 prime EST 
GATAGCTTTT TATTGTAATA GTAAAGAAAA TCCAAATCTT TAGGTATTAC 
AATGATAGTA ATTGTTGAAA CTCCCCTATT ATTTTTGATT GACCTTAAAA 
GGGAGTCCAA CCAAAAGATA TTCTAGACAA AGCCTCAAAA AATTGCCAAG 
ATCAAATCAC AAATCATACA CATCTCAGTT GAGATGAAAA ACAAAACAAA 
TCACATATGA AACCGGAGAA AAAAAAGACA TATTTATCAT GTATGTATAT 
ATAGTGTTCA TCTTAATCGA AGAATTCCCA TTTGAATCGC GGAGGGACCG 
GTTTAACCGT TTCAGCCGCC TTGGCCGTCG ATGCGGAATC AAACATTTCC 
CATTTTGAAG CTACAACCGC CGGAGTACCT GATGAGGATG ATGCATTGGA 
ATTCCTAGGC TCCTCCTCCT CTTCCTCCAC AAACGATAAC AAATCGCGTT 
GCTCAAATCG CGTTTGCGTT TGCGGTTTGT GGCGGACGGA CTTGTTGACT 
TCAACTTTTT TGGCAGAGTT TTTGACTTTC AAGAGGTCGA GTGCCTCAAC 
GTACTTCTGA ACTCTTTGCA CCTGCATCTT CCTCATCAAT TTGACATCAC 
CATCAGCAAT AATAGCATCA AGTCTCAATA ACTGATTCAT CAACATCTCT 
ATCAGATTCA CAAGACTCTT CTCTTCAACT TTACC

Gene models with high sequence identity

  1. AT5G07220.1 [+] show detail - BCL-2-associated athanogene 3
    E-value: 0; Score: 99.71

AT5G07220.1

Model type
Protein coding
Short Description
BCL-2-associated athanogene 3
Curator Summary
A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.
Computational Description
BCL-2-associated athanogene 3 (BAG3); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 2 (TAIR:AT5G62100.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL05-21-E09 introduced

  • F04732 - Specific phenotypes were NOT observed.
  • F04927 - Specific phenotypes were NOT observed.
  • F07240 - Specific phenotypes were NOT observed.
  • F14111 - Specific phenotypes were NOT observed.
  • F25508 - seed::increased size / seed::increased length
  • F28106 - Specific phenotypes were NOT observed.
  • F29123 - seed::increased size / seed::decreased width

Mutant lines with disrupted or induced

10 mutant lines found