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RAFL06-11-J07

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda03080)

full reading [+] show sequence

Nucleotide sequence: RAFL06-11-J07 - full reading 
GTCCTGTTCT GATATCCATG GCTTTACCTT CGTGCTTAAA GACTGGAGCT 
TTAATGTCTC CGGCCACTGG ATTTAATTTT TCCGGCAGTC TTATGAAGTC 
AGACAGCGGC TTCGCCGTTC CGACAAAGTT ACAGAGTACT CGAAAAGGTG 
ATCGAGAGAG ATTGAGAGTC CAAGCTATTT TCAGTTTCCC TCCTGCGTTT 
CTGACAAGAA ACGGTCGAGC TGAGAAACAG AAACAGCTCA AACAAGAACT 
TCTTGAAGCC ATTGAGCCTC TTGAACGTGG TGCTACGGCC TCGCCTGATG 
ACCAGCTTCG GATTGATCAG TTAGCGCGTA AAGTGGAAGC AGTTAATCCC 
ACCAAGGAGC CTTTGAAGTC TGATTTGGTC AATGGAAAAT GGGAGCTCAT 
TTATACAACC TCTGCTTCGA TTTTGCAGGC AAAGAAACCA AGGTTCTTAA 
GATCAATAAC CAACTACCAA TCTATCAATG TGGATACACT TAAGGTGCAA 
AACATGGAGA CTTGGCCTTT CTATAACTCG GTAACTGGAG ACATAAAACC 
CCTCAATTCG AAGAAGGTTG CTGTGAAACT CCAAGTGTTT AAAATTCTCG 
GATTTATTCC TATAAAAGCA CCTGATAGCG CCCGCGGTGA ACTTGAGATT 
ACCTATGTGG ACGAGGAACT ACGGTTATCA AGAGGTGACA AAGGGAACTT 
GTTTATATTG AAGATGTTTG ATCCCACTTA TCGAATCCCT CTTTGATCTA 
CCAAACAAAT GGTACCGAGC CATCCATCAT ACATACTTGC TACAACTTGC 
TATGTCTCTC TTCATCATGT ATGTAATCTA ACATAAGAAA AATTAATAAG 
AGGGAAAAAA TGAGAC

Gene models with high sequence identity

  1. AT3G26070.1 [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT3G26070.1

Model type
Protein coding
Short Description
Plastid-lipid associated protein PAP / fibrillin family protein
Computational Description
Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT3G26080.1); Has 483 Blast hits to 479 proteins in 86 species: Archae - 0; Bacteria - 99; Metazoa - 0; Fungi - 0; Plants - 334; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-11-J07 introduced

  • F00229 - Specific phenotypes were NOT observed.
  • F03127 - Specific phenotypes were NOT observed.
  • F04348 - Specific phenotypes were NOT observed.
  • F05018 - Specific phenotypes were NOT observed.
  • F07444 - Specific phenotypes were NOT observed.
  • F09911 - Specific phenotypes were NOT observed.
  • F13830 - Specific phenotypes were NOT observed.
  • F14003 - Specific phenotypes were NOT observed.
  • F18713 - Specific phenotypes were NOT observed.
  • F19324 - seed::increased size / seed::increased length
  • F19450 - Specific phenotypes were NOT observed.
  • F21142 - Specific phenotypes were NOT observed.
  • F25613 - Specific phenotypes were NOT observed.
  • F26247 - Specific phenotypes were NOT observed.
  • F27813 - Specific phenotypes were NOT observed.
  • F27837 - Specific phenotypes were NOT observed.
  • F28803 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

17 mutant lines found