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RAFL06-15-J06

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda03213)

full reading [+] show sequence

Nucleotide sequence: RAFL06-15-J06 - full reading
ATTTTCTCCA TTGACGACAG CGAAGAAACG TCCCAACGAG CTCAGAGAGC 
CACACCAATC CTCCTTTTTC TTCTTCTTCT TCCTCCTGCA TTTTTGGTTT
TGGTGGCGTT GAGACATCAT CATGTCTAGC GCAGAGGATG TGAAAGAGCA
AGGAAACCTC ACCAACGAGG CAGAGAAGTC AATGCCATCA TCACAGCAGG
AGGAGGCTGT TGTAAAGAAG AAGTATGGAG GGCTCATGCC AAAGAAACCA
CCTCTCATTT CCAAGGATCA TGAGCGAGCA TACTTTGACT CAGCTGATTG
GGCTCTTGGA AAGCAAGGTG TTGCGAAGCC AAAGGGACCC CTGGAAGCCC
TTCGTCCCAA GTTACAGCCA ACGCAGCAGC AGACACGTTA CAGGAAGTCT
CCATGTGCTC CATCTGAGGG TGGTGAAGAT GGAGGAGCTG CTCAGGCCGA
GGGAGGTTCA GGCAACTGAG GCGTAGAGAG ACAGAGAGAT GTATGAAAAC
TCTTGTGTAA GAAGTCTGTT ATAATCGGAT ATTTTCTGTC CATTTGAAAC
ATCAGATATG GCTTTCATTA AAATCTTAAC TTGATCGAGA AATTATAGTT
TACCCTTTTG GTCCGGAT

Gene models with high sequence identity

  1. AT5G64130.1 [+] show detail - cAMP-regulated phosphoprotein 19-related protein
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT5G64130.1

Model type
Protein coding
Short Description
cAMP-regulated phosphoprotein 19-related protein
Computational Description
cAMP-regulated phosphoprotein 19-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: cAMP-regulated phosphoprotein/endosulphine conserved region (InterPro:IPR006760); BEST Arabidopsis thaliana protein match is: cAMP-regulated phosphoprotein 19-related protein (TAIR:AT1G69510.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-15-J06 introduced

  • F11204 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

6 mutant lines found