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RAFL06-15-L14

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda17211)

full reading [+] show sequence

Nucleotide sequence: RAFL06-15-L14 - full reading 
CCCGGAGTTT CCTACTCGCG TTGTTGTTCT TAAGTCATAA GTGTTAGGTT 
TGAATCAATC GCTCTAGTAC CAGTGGAACT GTTGATTTGC TTAGCGAGAA 
GATGGATCTG AGACCCTGAA GATGATCTGG AGTTATCTTG GTCCGAGCAG 
TTCATATGTC CTTAACATCT TCGGGGAATG TCAAAACCAT TTTATAAACA 
CAAAATCTTC TTCTTCTTCT TCCTTTCTCT CTCTCCATAA TTCTTGTTTG 
CGTCATTCAT TCATCACATA TCCACATACC ACAGAGACAG AGGAATCGTC 
CTTTATCAGA AATGGCAGGC AGTAATCTTC TCCAAGGTAT ACTCTATTTA 
TTCTTCTTCT TTGATGGTAC TACTATTTGA TCTGATCTAT TTTGAGTTCA 
TTTTTCTCTA GTTTGGACCT GGAATCAGTT TCTCTCTTGT TAGCTATTTC 
TCTCTTCTCT ATTGTATGAA ATCAAATCCA AATCTATTTT GCTCTTGAAG 
ACAACCTAAA GCTTTCACCT TTCTCTCTTC TTTACATTTC AATAAAGCTC 
ATTGAGCTAT TTTGCATTTT CAGTCTCTTC TAATAAGCTC AATGAGCATA 
TATCTATTTT CAGTCTCTTC TAATTAGCTG CAACAGAGCC AGCCATATGA 
TTCTTGTTGC TACTAAACCT AAAGACTCTC GCGGAAGCAG CAGCGATGAG 
ATGATGATGA ATGATCTGGA TGAGATAATA TTTGGTGAGA ATAGTTTGGG 
TCATTCTTCA TCTGCCTCTG GAAATGATCA GAAGAAGCAG AAATCGTCTA 
AAAACAATGA GCTCATTCAC TTGTGAGATG TGTTTTGTTT TTCTTAGTGG 
ATTTGGATTG GTGTTTAGTC TTTGGGAATA TGCATCAACA GTTGTTATGT 
AAGTAAACTA AAATTAGCAG CCTTGTGGGA TTGAAATATA TTTAGGGTGT 
AACCTGTATA TTTCGCTGCT CTGTTTTGGT GTTATTAATT TATCTAAGTG 
ATTAATCGTT AAGACTTAAA ATTATATCAA TATTTTAATT GACTAAAAAA 
AAAA

Gene models with high sequence identity

  1. AT3G03020.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT3G03020.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 5 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-15-L14 introduced

  • F17846 - rosette leaf::increased length / cauline leaf::abnormal / stem::present in fewer numbers in organism / stem internode::decreased length / rosette leaf::epinastic / cauline leaf::abnormal / stem internode::decreased length

Mutant lines with disrupted or induced

4 mutant lines found