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Full-length cDNAs
RAFL06-16-I17

RAFL06-16-I17

RIKEN Arabidopsis Full-length cDNAs

AGGTGGGACA CGGAAGCTGA GCTCTAATCC TGATCGGAGA TGGCGACTAG 
CGATTCTGAA TTCAATTCTG ATCTTCTTCT CGCTCACAAG CTTCCCGAGA 
CGCGTTACAC CTACAATGAA AGAGATGTAG CAATCTATGC TTTGGGAATC 
GGCGCTTGTG GCCAAGATGC TGTGGATTCC GATGAGCTCA AGTTTGTGTA 
TCACAGAAAT GGGCAGGATT TGATCCAGGT CTTACCAACT TTTGCTTCAC 
TATTCACACT TGGATCTTTG ACAGAAGGAC TGGATTTGCC AGGTTTTAAA 
TATGATCCTA GTCTCTTGTT GCATGGGCAG CAGTATATTG AAATATACAG 
GCCATTACCT TCCAAGGCTT CCTTAATTAA CAAAGTAAGC CTCGCTGGTT 
TGCAAGATAA AGGTAAAGCA GCTATCCTTG AATTAGAAAC CAGAAGTTAC 
GAGGAAGGGT CAGGGGAACT GTTATGCATG AATAGGACGA CTGTTTTCCT 
AAGAGGTGCT GGTGGTTTCT CAAATTCATC TCAACCATTC TCTTACAAAA 
ACTATCCAAG TAACCAGGGC TTAGCTGTGA AAATCCCACA AAGACAACCT 
TTGACAGTGT GCGAAGAGCG CACTCAGCCA TCGCAGGCAT TACTTTATAG 
GCTGTCTGGT GACTATAATC CTCTGCATTC AGATCCAGAA TTTGCAAAAC 
TTGCCGGATT CCCACGCCCG ATATTGCATG GGCTATGCAC ACTCGGGTTT 
GCAATCAAGG CAATCATCAA GTGTGTTTGC AAGGGTGACC CAACTGCTGT 
CAAAACCATA TCTGGACGAT TCCTCACGAC TGTTTTTCCT GGCGAAACTC 
TGATAACCGA AATGTGGCTT GAAGGCTTGA GGGTTATATA TCAGACGAAA 
GTGAAGGAAA GGAACAAAAC TGTGTTAGCT GGTTATGTTG ATATTCGTGG 
GTTATCTTCG TCACTTTAGA ATGTTAGGTC CTTAGATATA TTGGGCTGTC 
ATAATATTGC AAAGGTAATA AACATGTCAG AAGACTCTTG ATGTTTGCTT 
GGCGTAATGA GCCATTGAGC CATCAATAAA CACTCTTTGA TGACGGTCAC 
AATTTACTGA AATGGTTAGT TGTATCGTGT TACTGTTGTA ATAAATGTTG 
AGTGACGCAA AATGCACATG CCGGATGAAG CAAAATGCAT TGAAGAAAAT 
CCTTTTTGGG TGTCAATGAA CTGGAACATA AAGCCTGAGT

Gene models with high sequence identity

AT1G76150.1 [+] show detail - enoyl-CoA hydratase 2
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
superfamily	Thioesterase/thiol ester dehydrase-isomerase	1.1e-32
superfamily	Thioesterase/thiol ester dehydrase-isomerase	3.8e-30
HMMPfam	MaoC-like dehydratase	3.2e-28
HMMPanther	STEROL CARRIER PROTEIN X-RELATED THIOLASE	0.00071
HMMPanther	Short-chain dehydrogenase/reductase SDR	0.00071
Gene3D	no description	2.2e-37
Gene3D	no description	1.1e-38

See the detailed result >

AT1G76150.1

Model type: Protein coding
Short Description: enoyl-CoA hydratase 2
Curator Summary: Encodes a monofunctional enoyl-CoA hydratase 2, involved in the degradation of even cis-unsaturated fatty acids, gene expression is enhanced during the first 2 days of germination, as well as in senescent leaves.
Computational Description: enoyl-CoA hydratase 2 (ECH2); FUNCTIONS IN: oxidoreductase activity, 3R-hydroxyacyl-CoA dehydratase activity; INVOLVED IN: fatty acid beta-oxidation, unsaturated, even number, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MaoC-like dehydratase (InterPro:IPR002539), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); Has 2242 Blast hits to 2242 proteins in 541 species: Archae - 23; Bacteria - 1245; Metazoa - 172; Fungi - 395; Plants - 47; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink).
Link: InterPro Scan - TAIR

Mutant lines with RAFL06-16-I17 introduced

F19240 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

15 mutant lines found