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RAFL06-67-A19

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda03265)

full reading [+] show sequence

Nucleotide sequence: RAFL06-67-A19 - full reading 
ACACAGAGCA TTCCGTGGAA AAACCCCAAT AAAATCTCAG GCAAATCTCC 
GGCGTAATCG ATGGCGGAGG AGAATCAAGA AGAAACCCTA GAACTCAAAC 
CAAGTAGAAA ACCACCACAC TTTGTGCTAA TACATGGCAT GAGCTTAGGA 
TCATGGTGCT GGTACAAGAT CAAATGTCTC ATGGAAGTCT CTGGCTTCAC 
CGTCACTTGC ATCGACCTCA AATCCTCCGG CATCGATTCT TCATCCGTGG 
ATTCACTCAC TACCTTCGAC CAATACAACC AACCACTCAT CGACTTCCTC 
TCCTCTTTCC CCGAACAAGA ACAGGTGATA CTTGTGGGTC ACAGTGCAGG 
AGGGCTTAGC CTAACGAGTG CGATACAGAG ATTCCCTAAG AAGATCTGTC 
TCGCTGTTTT TATTGGAGCT TCGATGCTCA AAAACGGGCT TCAGACAGAT 
GAAGATATGA AAGATGGAGT GCCTGATCTA TCAGAACATG GTGATGTCTA 
CGAGCTTGGT TTTGGTCTAG GACCGGAGAA TCCTCCCACC AGTGCTATTA 
TCAAACCTGA ATACCGACGA AAACTACTTT ACCACATGAG TCCTCAACAG 
GAATGTTCCT TGGCTGCATT AATGATGAGA CCAGCACCAA TTTTGGCGTT 
AACGACAGCA AAACTGGAAG AAGAGGAAAA AGAAAAAGGA CAAGAGGAGC 
AAGTGCCGCG CGTGTACATC AAGACGTTAC TCGACCGGGT CATGAAACCG 
GAGCAGCAAG ACGCGATGAT AAGACGGTGG CCACCTAGCC AAGTTTACGA 
ATTGGAGAGC GACCATTCTC CTTTCTTCTC TAACCCTTTT GTTCTCTTTG 
GTTTACTCAT CAAAGCTGCC GTTTCCGTCG GTTCTATCTA AAACTATTTA 
AAGAACTAAA GGATTGCCTT TTGTTGGTTT TAAAACCGGT TAAGTGATCA 
GTATTGTCGA GGGAGTGTTT ATTTATTTTT GATTTTTGTG ACATTTTGGT 
ATTTTATATT AATCGTTTTG AAATAAATTA TGTTTTGCTT ATAAAAAAAA 
AAAAAAAA

Gene models with high sequence identity

  1. AT3G10870.1 [+] show detail - methyl esterase 17
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

Program Description E-value
HMMPanther ALPHA/BETA HYDROLASE RELATED 7.9e-12
HMMPfam Alpha/beta hydrolase fold-1 3.5e-06
Gene3D no description 1.3e-65
Coil coiled-coil 0
superfamily alpha/beta-Hydrolases 1.6e-40

See the detailed result >

AT3G10870.1

Model type
Protein coding
Short Description
methyl esterase 17
Curator Summary
Encodes a methyl IAA esterase. Methyl IAA is believed to be an inactive form of auxin that needs to be demethylated to exert a biological effect. MES17 does not act on methyl JA, MeSA, MeGA4, or MEGA9 in vitro. This gene is expressed in several tissues of seedlings and adult plants, with a higher relative level of expression in the seedling shoot apex and the adult stem.
Computational Description
methyl esterase 17 (MES17); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 18 (TAIR:AT5G58310.1); Has 1383 Blast hits to 1383 proteins in 290 species: Archae - 0; Bacteria - 591; Metazoa - 1; Fungi - 15; Plants - 599; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-67-A19 introduced

  • F26821 - seed::increased size / seed::increased length

Mutant lines with disrupted or induced

4 mutant lines found