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RAFL06-68-K06

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda07620)

full reading [+] show sequence

Nucleotide sequence: RAFL06-68-K06 - full reading 
ACACGCAATT TTCATTTCTC TCTTAACCGT AAACGAATCT CTCTTCTCAA 
AGTTTTATTT TCTCTCTGCG ATGGCTCAAG AAGATGTTAC TGCTGTTGCT 
ACTAACGGTG CTGGTCCGGT GGAGACGCAT CTTGTCTTCA CTGAGTTCAA 
GCAGATGTTG CTCGTTGAAG CTCAAAAGGT CGGTGACGCT GTTACTTTCT 
ACAAATCTGC TTTTGGTGCG ATCGAGTCTG GTCATTCTCT TTACCCTAAG 
CGTAAGCTTG ACCAAGAGCT TCCTCATGTT CTCTCTTCTG AGCTTAATCT 
CGCTGGCTCT TCCTTCGTTG TTTGCGACGT TTCCTCTCTC CCTGGTTTTT 
CTACTGCGAA ATCGGAAGGT TCGGGAGTGA CTTTTCTTCT CGGAACTAAG 
GATGCTGAAG CCGCCGTTGC GAAAGCTGTT GACGCCGGAG CTGTGAAAGT 
GGAGGTTACG GAGGCAGAAG TTGAACTGGG ATTCAAAGGA AAAGTTACGG 
ATCCTTTTGG TGTCACTTGG ATCTTCGCGG AGAAGAAGAC CGTGATCACC 
GACGAGAACA AAGAGGTTTA GAATCTGTCG TCGGATCTAA TTCTTCGTCG 
GTTTCTGAAC AAAAAAAACT ATCTATTATC CTAGGTTTAT GCTTTTATTT 
TGTCTTTTGT GGAATCCGGT AATCAGTAAA CCGGATCGAG TAGGCTAATG 
ACTTTCGGAT TCTAATTTCA CCCCTTTTGA CAAACTCTAA TCTTGGTGAA 
ATTGCATATT AATCTCGGGC AAAAAAAAAA AAAAAA

Gene models with high sequence identity

  1. AT5G48480.1 [+] show detail - Lactoylglutathione lyase / glyoxalase I family protein
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT5G48480.1

Model type
Protein coding
Short Description
Lactoylglutathione lyase / glyoxalase I family protein
Computational Description
Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-68-K06 introduced

  • F01813 - Specific phenotypes were NOT observed.
  • F07832 - Specific phenotypes were NOT observed.
  • F09901 - Specific phenotypes were NOT observed.
  • F13038 - Specific phenotypes were NOT observed.
  • F15215 - seed::increased size
  • F18404 - Specific phenotypes were NOT observed.
  • F21621 - Specific phenotypes were NOT observed.
  • F25142 - rosette leaf::present in greater numbers in organism / rosette leaf::abnormal / whole plant::decreased height / fruit::decreased length / stem::present in greater numbers in organism
  • F27103 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

9 mutant lines found