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RAFL06-68-M06

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda03311)

full reading [+] show sequence

Nucleotide sequence: RAFL06-68-M06 - full reading 
ACATAAAAAT CTCTTCGCCG CACAATTGCT CCAATCTGTT TCTTCTAGCC 
GGCCAAAATG GGTTTTAAGA GATTCGTGGA GATTGGGAGA GTGGCGCTCG 
TTAACTACGG CGAGGATTAT GGAAAGCTCG TGGTTATCGT CGATGTAGTC 
GACCAAAACA GGGCACTTGT GGATGCCCCT GACATGGAGA GAATCCAGAT 
GAATTTGAAG AGGTTGTCTC TTACTGACAT CGTCATTGAT ATCAACAGAG 
TTCCCAAGAA GAAGGTTTTG ATTGAGGCAA TGGAGAAGGC TGATGTGAAG 
AACAAGTGGG AGAAGAGTTC ATGGGGTAGG AAACTTATTG TGCAGAAGAG 
AAGAGCTGCC CTCAATGATT TTGACAGGTT CAAGATCATG TTGGCCAAAA 
TCAAGAGGGC TGGTATTGTG AGGCAGGAGC TTGCTAAGCT AAAAAGGGAG 
ATCGCTGCTT GATTTCTTAA TTATGATCCA TTACCAAATC TTATTTTTGC 
AACTGTTTTT TTAGTGCAAA TTATGACAAG TTGAGTTTTT TTTAGTGCAA 
ATTATGATAT CAATTTTGCT GATTCCGGGC TACTAAATAG TGAATTTTTT 
TTGCTATCGG ATATTATTAT TTTAGTTTAG TTTTTCTTTC TAAAAAAAAA 
AAAAGAAAAA AAAAAAAAAA AA

Gene models with high sequence identity

  1. AT2G20450.1 [+] show detail - Ribosomal protein L14
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

Program Description E-value
HMMPanther 60S RIBOSOMAL PROTEIN L14 2.6e-63
HMMPfam Ribosomal protein L14 1.5e-29

See the detailed result >

AT2G20450.1

Model type
Protein coding
Short Description
Ribosomal protein L14
Computational Description
Ribosomal protein L14; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, endoplasmic reticulum, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14 (InterPro:IPR002784); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14 (TAIR:AT4G27090.1); Has 732 Blast hits to 732 proteins in 320 species: Archae - 80; Bacteria - 0; Metazoa - 273; Fungi - 143; Plants - 110; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-68-M06 introduced

  • F11611 - rosette leaf::present in greater numbers in organism / stem::increased thickness / cauline leaf::epinastic / stem::abnormal
  • F13642 - rosette leaf::dark green / rosette leaf::decreased size / rosette leaf::increased width / cauline leaf::decreased size / cauline leaf::present in fewer numbers in organism / stem::decreased thickness / whole plant::decreased height
  • F18823 - Specific phenotypes were NOT observed.
  • F24331 - seed::increased size
  • F26311 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

5 mutant lines found