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RAFL06-70-D22

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda07646)

full reading [+] show sequence

Nucleotide sequence: RAFL06-70-D22 - full reading 
AAAAATAAAA CGAATTTTTG CAGTGGCGAA GCTTGGAGCC TCTTTCATGT 
GATGGCCTTG AACTTCTTCT CCACTTCTCT TCACCCAATT TCAAACCCAT 
CTTCTTCCTC TCGATCCAAA CAGAGCCATC ATCTCCTTCT GCAACTCTCT 
TCTCCTCCAG CAACACGTGT CCGCTCCGAG CGAAGTGAAA TCGGCGTCAC 
TGACGACAAC AACAACAACA ACGATACTTC TTCGTCTTCT TTCTCCGGTT 
CTTCGTCTTC TTCATCAGTA CGCACACAAC TAGATCTCCT TGAGCAGCTA 
ACTTCAACAA GTGATGGGTA CTTAAGTGAT GGTGGTGGCT CAAGAGGACT 
CACTATTCGT GACCAATTGG CTGGACTTGT TGGTGACAGA GACGATGATT 
TCAGCATTCC CTTAGGCAAG AACTTAAAGA AAGTGAGTCC TAAATTCTTA 
ACGATATCTC AGAAAAGGAA CATTAAGAGA CAAAGCTACC TTAATGAGGT 
CTCTCAGAGG AATGATTCTG TTTTCTTTGC TACTATTGGC GCCTTTGTAA 
TCCTTCCTCC TTTGGTCATT CTAGCTATTG CTATCTTAAC TGGCTATGTT 
CAACTCTTCC CTTAAGTATA AATTTATATA CTTTGTCAAA TTTGCATATA 
GCAGGAGTTG CTTGTATTCA GAAATCAGAT TGTCCAATGA TAAATATAGG 
TTGATCTTTT CTTCGAAAAA AAAAAAAAAA A

Gene models with high sequence identity

  1. AT2G42975.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
    E-value: 0; Score: 99.86

 

InterPro Scan Digest

See the detailed result >

AT2G42975.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; Has 32 Blast hits to 32 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-70-D22 introduced

  • F06218 - seed::present in fewer numbers in organism / gynoecium::abnormal / flower::abnormal / fruit::decreased length / stem::present in greater numbers in organism / rosette leaf::increased size / cauline leaf::increased size / petal::abnormal / flower::abnormal
  • F12816 - rosette leaf::dark green / rosette leaf::decreased size / rosette leaf::increased width / cauline leaf::decreased size / cauline leaf::present in fewer numbers in organism / stem::abnormal / whole plant::decreased height / stem::present in fewer numbers in organism
  • F17901 - Specific phenotypes were NOT observed.
  • F19237 - Specific phenotypes were NOT observed.
  • F26845 - Specific phenotypes were NOT observed.
  • F29035 - Specific phenotypes were NOT observed.
  • F30020 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

7 mutant lines found