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RAFL06-73-F19

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda03439)

full reading [+] show sequence

Nucleotide sequence: RAFL06-73-F19 - full reading 
CAGAGAAAAA GTTTGCAGTG AGAAGGAGAT TGATTAATCG ATCTGAGAAA 
GATGGGAGAT TCGGAGTCAT TTGTTGGGAA AAATTGGAAT GGATTGAAGG 
ATTTCTGGAG TGATAGGTTA TCATTTTTCG AAAATTACAC CAGATTCACC 
AAACGCGACG CGCCTCTTCC TTCTTGGTCT TCCTCCGACG TCGAGGAATT 
CATTGCCTCC GATCCCGTTC ATGGACCCAC CCTGAAAACG GCTAGGGAAG 
CTGTGACGTT TGGTGTTACC GGAGCTGCAC TTGGAGCTGT CTCTACTGCT 
GCTTTTGCCT GGAAATACTC CAGGAGTCCA CATGGTGCTG CATTGTCCTT 
CTTAGGAGGA GGTGTTTTTG GTTGGACCTT TGGGCAAGAG GTCGCCAACC 
ACACACTGCA ACTCTACAAG TTGGACACAA TGGCAGCCCA AGTTAAGTTC 
ATGGAATGGT GGGAACGTAA GTCTCAATAA AGGTCCTGAA TCTAAAACGA 
AGACGTGTGC TGCTTTCTCG TCCAGAGTAT CTTCTTGGGA ACAACATGAA 
ATGCTGATTA TCCATCCATT TCCAGACTTT CGCCTTTGAA ACTTTTTCTA 
TTCTCACTCT TGGAACATGT TTGCCTTGTC TTAATAATAC AACATGCCTC 
ATGAATGTTT TGAAGATTTG AGAAAATGAA TTCAAAGAAA CCAAATGGTC 
CC

Gene models with high sequence identity

  1. AT1G08480.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT1G08480.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane, plastid, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-73-F19 introduced

  • F00730 - Specific phenotypes were NOT observed.
  • F06914 - Specific phenotypes were NOT observed.
  • F25330 - seed::increased size / seed::increased length

Mutant lines with disrupted or induced

6 mutant lines found