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  3. RAFL06-73-M13

RAFL06-73-M13

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda03457)

full reading [+] show sequence

Nucleotide sequence: RAFL06-73-M13 - full reading 
GTCATCAACC AAAGTAAGAA GCGCACACAC ACAACATATT TCTTTCACTA 
CCCAAAGAGA TGGCGACATC GGGAACATAT GTGACGGAGG TTCCATTGAA 
AGGATCGGCG GATAAACACT ACAAGCGGTG GAGAGATGAG AACCACCTCT 
TCCCCGATGC CATCGGCCAC CACATCCAAG GTGTCACTGT CCACGACGGT 
GAATGGGACT CTCATGAAGC CATCAAGATT TGGAACTATA CATGCGATGG 
GAAACCGGAA GTGTTCAAGG AAAGGAAAGA GATAGACGAT GAGAATATGG 
TGATAACGTT CAGAGGACTA GAAGGTCACG TCATGGAGCA GCTTAAAGTG 
TATGATCTCA TATATCAGTT CAGCCAAAAG TCTCCCGATG ATATCGTATG 
CAAGATCACA ATGATTTGGG AGAAGCGAAC CGATGATTCG CCTGAGCCTA 
GCAACTACAT GAAGTTCCTC AAAAGCGTTG TTGCTGACAT GGACGAGCAT 
GTTCTCAAAG CCTAAATCCC TTTCGAACCA TCGTCATCAC CTATCATCAT 
CATCATCATC ATCATCATAC ATCTCCCTTT GTGTGTGTAC TTGTATGGGT 
GTTTGAATCT TTCATTTGCG TAGTACAAAA TCATTTTTAA ATAAATTATG 
GTTTGAGC

Gene models with high sequence identity

  1. AT2G01530.1 [+] show detail - MLP-like protein 329
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

Program Description E-value
Gene3D no description 1e-18
superfamily Bet v1-like 2e-34
HMMPfam Bet v I allergen 1e-59

See the detailed result >

AT2G01530.1

Model type
Protein coding
Short Description
MLP-like protein 329
Computational Description
MLP-like protein 329 (MLP329); FUNCTIONS IN: copper ion binding; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 328 (TAIR:AT2G01520.1); Has 358 Blast hits to 331 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-73-M13 introduced

  • F19250 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

8 mutant lines found