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RAFL06-73-P11

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda03463)

full reading [+] show sequence

Nucleotide sequence: RAFL06-73-P11 - full reading 
ACACAGCATT ATCCAAAACT CAAAATTACA GCGTTGAAAC AGAAACCGAT 
CTCGTCGCTG ATTCTCTTTT CTTCGGATCC TTCTAGATAA TGGCTCGATC 
TTTCTCTCGT TCACTTTCTC TATCCAAAGG CCGTTTCGCC GCCGCGTCAT 
CCTCTCTCCT CCCTTCGTCG CACCTTGTTT CATTCCGATC TCAATCTTCC 
GATCGTCGGG GAGATCTGTA CGAGATTGAT ACCTCCGCGG CTTCTCAATC 
GCCGTCGGAT CCTTTAATAC AGAAGCTAGA AGACGCCGTT CACCGGATTT 
TTGTGCGCCG AGCTCAGCCT GATTGGCTCC CTTTTGTTCC TGGTGCGTCT 
TATTGGGTCC CTCCTCCTGG ATCTGGATCT CAGTCTCATG GAATCGCTCA 
GCTCGTTGTG AAACTCGCGA ATCCGTTAAC ACACGAAGAA TCTTTATCTA 
CCAATTCTTC TCATGGATGG CCTTCCTCCG ATTATTTCCT TAAAGGTGTT 
CAACCTCAAT TGATGGAGAC CAAGACCGAG ACAACTTCAA ATTCCGAGTC 
TCACTCTGAG GACGAGGAAG TGTAAAAATG ACACTGCTTG TTTGGGCTCT 
TCAGGATCTC TTGTCAAGAC CAAGAGCTGC CGAATTCGGA CAACCAAGAG 
CAAGTGAAAA GACGTGAAAT AGAACGACCA TATTTCTATA CCTGATACCA 
AAATGTGGAA TATCGAATAA GACTAGTGTT GTAGGCTTGT GTAGCATGTC 
CCGCTGTTTC TCTTTTAAAC AGTTGTTGTA TATATATATC TCTGTTTCCT 
TGCTC

Gene models with high sequence identity

  1. AT1G16840.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); ...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT1G16840.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-73-P11 introduced

  • F08819 - seed::increased size / seed::increased length / seed::decreased width

Mutant lines with disrupted or induced

2 mutant lines found