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RAFL06-74-C05

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda03472)

full reading [+] show sequence

Nucleotide sequence: RAFL06-74-C05 - full reading 
ATTCCATTTC GTATTTTTCT CTTCTTCCTC TTCTGAAAAA TTAGGGTTTG 
AGTTCTTCTT CTAATCGATC AGAAAGATGG GTGGAGGAAA CGCACAGAAA 
TCAGCCATGG CTCGTGCCAA AAACTTGGAG AAGGCTAAGG CTGCAGGAAA 
AGGTAGCCAA TTGGAAGCTA ACAAGAAAGC TATGTCGATT CAGTGCAAGG 
TTTGTATGCA AACATTCATC TGCACGACAT CGGAAGTGAA ATGCAGGGAG 
CACGCGGAGG CGAAGCATCC GAAAGCCGAT GTTGTCGCTT GTTTCCCTCA 
CCTCAAGAAG TGATGAAAGC TATTATCTCA ACTATAAAGG ATTCCAATGT 
ATAACGTATG GATCCTCATC TTTCCTATGT TTGTATCAAA GTCTCGACAA 
ATTTTATGGT TTCTATTTCT CTCTACTTGT TTCAACAATA AGTCTCTTGC 
TATGATTATA TAATGAAGCT TTGTGTGGAT

Gene models with high sequence identity

  1. AT2G23090.1 [+] show detail - Uncharacterised protein family SERF
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

Program Description E-value
HMMPfam Uncharacterised protein family SERF 9.9e-14
Gene3D no description 4.3e-28

See the detailed result >

AT2G23090.1

Model type
Protein coding
Short Description
Uncharacterised protein family SERF
Computational Description
Uncharacterised protein family SERF; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family SERF (InterPro:IPR007513); Has 164 Blast hits to 164 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 42; Plants - 89; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-74-C05 introduced

  • F09906 - Specific phenotypes were NOT observed.
  • F11545 - seed::increased size / seed::increased length
  • F14021 - Specific phenotypes were NOT observed.
  • F30431 - stem::abnormal / cauline leaf::hyponastic

Mutant lines with disrupted or induced

7 mutant lines found