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  3. RAFL06-74-I12

RAFL06-74-I12

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda03505)

full reading [+] show sequence

Nucleotide sequence: RAFL06-74-I12 - full reading
ATCAAAAACC CAAATCTCTC TGTTCGCAGA GAGGATCAAT TCGTGATTCA 
GAGAATCAAA CTTACTGTGA GAGAGAGATA ACGAAGATGG ACGCTATGAG
GAAGCAACTC GATGTGCTCA TGGGAGCTAA CAGAAACGGC GATGTCACTG
AGGTCAATCG CAAATACTAC GACCGCGATG TTTGCCGTCT TTACCTCTCT
GGTCTCTGCC CTCACGAGCT TTTCCAATTG ACGAAAATGG ATATGGGTCC
TTGCCCAAAG GTGCACTCTT TGCAGCTGAG GAAAGAATAT AAAGATGCAA
AGGCAAAAGG TGTTGACAAC TATGATAGGG AATTGGAAGA TGCGATAGAT
AGGCTTATTG TTGAGTGTGA TAGGAAGATT GGTAGGGCTC TTAATCGTCT
TCAAGAAGAG GATGCCAAAG CTGCCATTGC AATTTCTGTC ACAGAATTTA
CTCAGTCACC TGAAATTCTT GAATTATCGA AGCAAATCAA AGAAAAGATG
AAGGAAGCAG ACCTGCACGA TCTTGAAGGC AAAACAGATC TGAAGATTAG
AGCTCTTGAG TTAGTTGAAG AGATGAGGAC GAAGAGAGCT GACCTACAGG
CTGTGCTACT GTTGGATGCC TTTAACAAAG ATAGGACATC CTTGCAACAG
GCAGTTCCAG CTCAGCAACC AGCTGCAACT TTACCTCCGC CCGATCCTCG
TACTCAAGAA ATGATCAATG AAAAACTAAA GAAAGCAGAA GAGCTTGGTG
AACAAGGGAT GGTTGATGAA GCGCAGAAAG CACTAGAAGA GGCGGAAGCT
CTTAAGAAGC TTACTGCTAG ACAAGAACCT GTAGTGGATT CAACCAAGTA
CACTGCTGCT GACGTGCGCA TTACAGACCA GAAGCTGCGT CTATGTGACA
TATGCGGAGC ATTTTTGAGC GTCTATGACA GTGATCGTCG GTTAGCTGAT
CATTTTGGAG GGAAGCTTCA CTTGGGTTAC ATGCTGATCC GCGACAAATT
GGCAGAGCTT CAGGAGGAGA AGAACAAAGT TCACAAGGAA CGGGTCGAAG
AAAGGAGATC AAAGGAGAGG AGTAGAGAGC GAGAATCAAG TAAAGACAGA
GACGGAGGAG ATAACCGTGA CCGAGGAAGA GATGTTGACC GCAGGAGTAG
AGATCGTGAC AGGCACCATG ACCACCGAGA ACATGACAGA AACTATAATC
AGTCACGTGG CTATGACTCA AGAAGCCGGC GCAGTTCACG GTCCCGGTCT
AGGGAAAGAC CGAGGGATCA TGATCGCCGC AGACGCCATG ACCGCTACTA
AAACCCTGCC AAAGATGGTT GCACCTGGTT TAAGAGGTTC TTACAGATGC
GTTTAGGATC TATTTGGAGT TACAAACACT TTCTTTTTTC TTTGCTCAAG
TGTTTTAAGG ATTTTTGAGA TTGTAACTTA CTTTAAGTTT GTAAGAGGAG
CTTCTTCAGA TATCTTTAAT TTGTTTTTTA TGTTGTTGAC ATCAAAGACT
TGCGAGTAGA AAGAAGATTT TGTTGATCC

Gene models with high sequence identity

  1. AT5G17440.1 [+] show detail - LUC7 related protein
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

Program Description E-value
HMMPanther UNCHARACTERIZED 0
HMMPanther LUC7 related 0
HMMPfam LUC7 related 1.9e-41
HMMPfam LUC7 related 1.8e-51
Coil coiled-coil 0
Coil coiled-coil 0

See the detailed result >

AT5G17440.1

Model type
Protein coding
Short Description
LUC7 related protein
Computational Description
LUC7 related protein; CONTAINS InterPro DOMAIN/s: LUC7 related (InterPro:IPR004882); BEST Arabidopsis thaliana protein match is: LUC7 related protein (TAIR:AT3G03340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-74-I12 introduced

  • F09547 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

9 mutant lines found