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  3. RAFL06-75-E22

RAFL06-75-E22

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda03560)

full reading [+] show sequence

Nucleotide sequence: RAFL06-75-E22 - full reading 
AGAGAGAGAG ATCCATTCAA TTCCAAAAGG ATTCTCTTTT GGGAAAACCC 
TAAATCGACC CACCAAATTT GGAGACTGTG ATTGAGCATG AGCGTCAGAA 
GTTGATGAAC AAAGTCGACG AAATCGAGGA TTTCAGATTC GAGGATCTCG 
AAATGGAGAC GGAGAAAGAT AAGGAAAGGA TGATGACGCC GACGACGAGA 
ATGTCTTATT CATCTTCGTC GTCTCCGTCT CCATCTTCGG CTTCATCATC 
TGCTGCGTCC TCTCTCGCTG CCAAGGCAAT TCGAGCATCT TCTGCGCATA 
GAGACTCTTC TCTTTCTTCT GCTTACTCGT CTCCTTCTTC TGCTCCTGTT 
CCCACTCCTC CCAAGGAGGT GAATAAGGCT TATGAGTATA CTTCTATGAA 
GAGTTTGAAT GAACCAAAAC GAGGCTTTTG GGGAAGTTTA GCTAGTAAAG 
CTAAGGCTTT TTTGGATGAG GATGATCCTA ATCAGTTGCC TCAAAGTCCT 
AAGAGAATGG AGCAGAGCAT ACCTTCTGCG ACAACTTCAG GAACTAAGGA 
AGCTGGTCAG ACTGGTAGGA AAAGCGAGAA TCCTTCATTA CAGAGAAGAT 
TAGATGCGAT CACTTCATCG TTGAATTACA TTGGTGGCAC CATTGGTACT 
GTTGTTGAGG AGGGTATTAC AGCTGTGGAG AATCGTACTG CAGGCATCAT 
TCAAGAAACC CGTAAAAAGA TTAAAAAAAA GCCAAGTCTT ACAAGGAACC 
AGCAGAATCC TGAGATACAA GCTGATTTGG AGATTCAACT AAAGGCATCT 
CGCGACGTTG CAATGGCCAT GGCTGCCAAG GCAAAGCTTT TACTTCGGGA 
GCTGAAGATG GTAAAGTCTG ATCTGGCTTT TGCGAAGCAA CGATGCGCAC 
AGCTGGAAGA AGAAAATAAG GTTCTGAGGG AGAACCGTAG TGGCGACAGT 
CAGACAGATG ACGATGATCT GGTGCGACTT CAACTGGAAA CACTGTTAGC 
TGAGAAAGCA CGGTTGGCTC ATGAAAACTC GATATACACC CGCGAAAACC 
TCTATCTGAG AGGAGTCGTC GAATATCACC AGCTAACAAT GCAAGATGTG 
GTCTACTTTG ATGAGAAGAC TGAAGAAGTA ACGGAGGTAT ATCCCATTAA 
TGTGTCTTCA ATGTCTTCTT CATCAGATAA CTCTTACAAT CCAAATCCAA 
GTTTCTTGGA GCTCAAATGA AACACCACAA CAACTATCAG TTTCTGCTGT 
TCTTGTTGTG AATCAGACAA GAAGACAAAT CGTTGCCTGT AATTGCTCTG 
TATTTGTAGA AATATATATA CTCTGTACTC TTTATTTGGG GTGGGGTCTT 
AAGAATTAGC AGTGAATGTT ATTTATTACC CTTAATTAAC TTAAATAAAA 
GAAGAATGTT CTATT

Gene models with high sequence identity

  1. AT2G30530.1 [+] show detail - unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRE...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT2G30530.1

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1); Has 5513 Blast hits to 872 proteins in 154 species: Archae - 0; Bacteria - 30; Metazoa - 615; Fungi - 144; Plants - 149; Viruses - 12; Other Eukaryotes - 4563 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-75-E22 introduced

  • F14220 - Specific phenotypes were NOT observed.
  • F29037 - seed::increased size / seed::increased length

Mutant lines with disrupted or induced

6 mutant lines found