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RAFL06-77-P05

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda03707)

full reading [+] show sequence

Nucleotide sequence: RAFL06-77-P05 - full reading 
AATTTCGTTT CGACATATTT CGCGATTCGT CTAAGGTTTT GTTACTGATT 
GAGAAAACAT GGGAGGTGAC AATGATAATG ACAAAGACAA AGGGTTTCAT 
GGGTATCCTC CCGCTGGATA CCCACCCCCT GGGGCTTATC CACCCGCTGG 
ATACCCACAA CAAGGTTACC CTCCACCACC CGGTGCTTAC CCGCCTGCAG 
GTTATCCTCC GGGTGCCTAC CCACCTGCTC CTGGTGGTTA TCCTCCCGCC 
CCTGGTTATG GTGGTTATCC TCCAGCTCCT GGTTATGGAG GTTATCCTCC 
TGCACCTGGT CATGGTGGTT ACCCTCCTGC TGGCTATCCT GCTCATCACT 
CAGGACACGC AGGAGGAATT GGGGGTATGA TTGCAGGTGC TGCAGCTGCC 
TATGGAGCTC ACCACGTAGC TCATAGCTCT CACGGTCCTT ACGGACATGC 
TGCATATGGT CACGGTTTTG GCCATGGTCA TGGCTATGGC TATGGTCATG 
GTCATGGTAA GTTCAAGCAT GGGAAGCACG GGAAGTTCAA GCATGGGAAG 
CATGGAATGT TTGGAGGAGG CAAGTTCAAG AAGTGGAAGT GATCTAGTTA 
ATACCTTTTG TGAATCTGTC TGGACTGACC AATGTTTCAA ATAAGCCCTA 
AACATTATAT AAGTTGACTT TCGTCGGTTA GATTGCTGGT TCGAGTTGGA 
ATAATTGAAA CTTAATTAGT ATCAAATCTT ATTGTGTACT TTAAAGCTAT 
CGTTGGCTTT ATAATGACAG ATTCTGGTTT CGGTGTGTTG TTTTAAGATT 
TTTGTATATA CTGTTTTTTA CATTGCTTAA GCTTATAGAA GTCATGATTA 
TGACT

Gene models with high sequence identity

  1. AT5G45350.1 [+] show detail - proline-rich family protein
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT5G45350.1

Model type
Protein coding
Short Description
proline-rich family protein
Computational Description
proline-rich family protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-77-P05 introduced

  • F06017 - cauline leaf::decreased size / stem::desaturated green / whole plant::decreased height
  • F19209 - Specific phenotypes were NOT observed.
  • F19730 - seed::increased size / seed::increased length
  • F23412 - Specific phenotypes were NOT observed.
  • F24129 - stem::abnormal
  • F24650 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

7 mutant lines found