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  3. RAFL06-78-J23

RAFL06-78-J23

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda03735)

full reading [+] show sequence

Nucleotide sequence: RAFL06-78-J23 - full reading 
GGGATCTTCT TCTTCGAACA AATTCGAAAA CAGCACACGG CGATGGCGTC 
GCTTATACTC GGAGCTCCTC CGCGAGTCAC CGTCGCATTA CCTTCCTCAC 
GGTTATCATC TTCTCACTCT GAAACTGCCG GTGTCTCTCT CTCTTGCTTC 
ACTCATCAAT TCTCTCTCTC CACTTCCTCA TCCAGCTCAA TTCCACTCGT 
GTACTGTGGC AGAGGTGACC GGAAAACAGC TAAAGGAAAG CGTTTCAATC 
ACTCTTTTGG GAATGCGAGG CCAAGAAACA AGAGCAAAGG AAGAGGACCG 
GAGAGAGTAC CGGTTCCTCC AGCACCACCG AGGAAAGATA AGTTTGAGAA 
CGACGAGAAG ATCAAAATCG ATATCGACGA GTCTCTCTTC TCTAATTAGA 
AATATGAGAT TCTTCACTTG TTGTCTCTCA CTGTAATTTT AATTTGTTTT 
TTGAAAAGCT TTGATGCTAC GACTCTTTTG TTGTTAAAAA CATCTCCAAA 
GTTCTCATCT TTTTATGAAA AGTTTGCTTC TTTATG

Gene models with high sequence identity

  1. AT2G38140.1 [+] show detail - plastid-specific ribosomal protein 4
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT2G38140.1

Model type
Protein coding
Short Description
plastid-specific ribosomal protein 4
Curator Summary
plastid-specific ribosomal protein 4 (PSRP4) mRNA, complete
Computational Description
plastid-specific ribosomal protein 4 (PSRP4); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 87 Blast hits to 87 proteins in 23 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-78-J23 introduced

  • F14035 - Specific phenotypes were NOT observed.
  • F17426 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

3 mutant lines found