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RAFL06-78-L19

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda03745)

full reading [+] show sequence

Nucleotide sequence: RAFL06-78-L19 - full reading 
AAATCTAAAA CCCTAAATTC TCAATTGCTC GTCACACTTC GTCACTCCAC 
CAGCGACAAT CGCCGCAGAA ACCTCTACGA AACTTGCTAC AATGGAGTTT 
TCATCACAAG ACGACGATTT TGGAGGAGAC GATTCCGCTG CTAATGCCAC 
CAGGGCTTCA GGTAATAGAA GAAGCTTCGG TGATCTTGAA GACGATGAAG 
ATGATATTTT CGGATCAACA ACGGTAGCGC CTGGTGTTAG AACTGGGATG 
ATTTTGTCTC TCCGAGGAAG TCTTAAGAAT TGTAAAGATG ATCTTGCTTC 
ATGTCAAAAT GAGCTCGAGT CAGCAAAAAC AGAGATTCAG AAGTGGAAGT 
CAGCGTTTCA GAATGAGTCC TTTGTTCCCG CTGGAAAATC TCCTGAACCA 
AGATTTTTGA TTGATTATAT TCAAAACCTA AAATCTTCTG AGAAATCTTT 
GAAAGAACAG TTAGAAATCG CAAAGAGAAA AGAAGCGTCA TGCATTGTAC 
AATATGCGAA ACGGGAACAA GAAATGGCAG AATTGAAGTC AGCTGTTCGC 
GATTTGAAAT CTCAACTCAA GCCAGCGTCA ATGCAGGCGA GGAGGTTGTT 
ACTGGATCCA GCAATTCATG AAGAATTTTC ACGTCTGAAG AATCTAGTAG 
AGGAAAAAGA CAAGAAGATC AAGGAACTCC AGGACAACAT TGCAGCAGTT 
ACTTTTACTC CTCAAAGCAA GAATGGAAAG ATGCTTATGG CAAAGTGCAG 
AACCCTGCAA GAGGAAAATG AGGAGATTGG GCACCAAGCT GCCGAAGGAA 
AGATTCATGA ACTAGCAATA AAGCTTGCAA TGCAGAAGTC TCAAAACGCG 
GAACTTAGAA GTCAATTTGA AGGACTGTAC AAACACATGG AGGAATTAAC 
TAATGATGTT GAGAGATCAA ATGAAACGGT GATAATATTG CAAGAGAAAC 
TGGAAGAGAA AGAGAAGGAG ATAGAGAGAG TAAAGAAAGG ACTGGAAATT 
GTGTCTGAGC TAGTAGGTGA CAAGAAAGAT GAAGTTGATG AAATTGATGA 
AGATGCAAAA GAAGAAATTG CTGGTGGAGA ATAGGAATTT GTAGCTTTCA 
AAAAATGTTT TGTACATTTT GAAGTTCAAA ATCACATTTC TTCATTCGTT 
ATCTGTTTCA TGAAACAGAA AGTTCTAAAC AAAAAAAAAA AAAAAA

Gene models with high sequence identity

  1. AT3G54170.1 [+] show detail - FKBP12 interacting protein 37
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

Program Description E-value
Coil coiled-coil 0
Coil coiled-coil 0
Coil coiled-coil 0
Coil coiled-coil 0
Coil coiled-coil 0

See the detailed result >

AT3G54170.1

Model type
Protein coding
Short Description
FKBP12 interacting protein 37
Curator Summary
Encodes protein that binds FKBP12. This interaction is disrupted by FK506 but not by cyclosporin A.
Computational Description
FKBP12 interacting protein 37 (FIP37); Has 21268 Blast hits to 13212 proteins in 1142 species: Archae - 433; Bacteria - 2157; Metazoa - 10991; Fungi - 1638; Plants - 938; Viruses - 51; Other Eukaryotes - 5060 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-78-L19 introduced

  • F08223 - Specific phenotypes were NOT observed.
  • F20548 - rosette leaf::variegated
  • F21741 - rosette leaf::increased length / stem::increased thickness / stem::present in fewer numbers in organism / stem::abnormal

Mutant lines with disrupted or induced

3 mutant lines found