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RAFL06-80-H11

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda03781)

full reading [+] show sequence

Nucleotide sequence: RAFL06-80-H11 - full reading 
ACTGAGTCGC CATGGAACTG GTGTCTCTTC CGATCCACCA CCGTACGGCG 
CCGCCGAATT TTCCACCACT CGAAACTGGA AATCCAGTAG CTAACCGGAT 
TGGACAAGCT CTACGATTCA GCAATGTTAG AATGAGAAAG CCCGCGTATT 
TAGGAACGAT CTTATCTGAG AAATCAAGAG CAAGAACATT AACGACGGCG 
GAAGCAGTTT CCGGAAGTGG AGTTTCGCTT CCGCCGCTGG ATTTGACTGA 
GGATAATATC CATTTGGTAC TATCCGAAGC TCGTATCGAG CTAGCACAAC 
TCTTCGACTC ATCGGTTGGG ATAACAGGAC AAGTAGAGTT AGTGGAACTA 
GACGGACCAT TCGTTACGAT AAGTTTAAGA GGCAAGTTTT GGCATACGCG 
TGCAATGGTT CTAGCTCGAC TTGGGAACTA CTTAAAACAG AGGATCCCTG 
AGATTTTGGA GGTTAATATT GAAGATGAAA AGCAACTCGA TGATAGTCCT 
GCAAATTTCT AAATCTTCCA TTTTGTTCAT TTGGAAAATA TTTATTGATC 
TTTCTTGCTG CTTAATGTGA CTTTGAAGTT TGATGATGCT TATGAGTTGT 
TAAAACTCTG TTGAGTATCT AAAATCGATG CTTTGTAGCA AAGTATACAT 
CGTTTCTAAA AGCCCAAAAA AAAAAAAAAA A

Gene models with high sequence identity

  1. AT2G33180.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT2G33180.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-80-H11 introduced

  • F02518 - Specific phenotypes were NOT observed.
  • F03838 - Specific phenotypes were NOT observed.
  • F04047 - seed::decreased size / seed::decreased length
  • F04241 - Specific phenotypes were NOT observed.
  • F05510 - seed::increased size
  • F06439 - Specific phenotypes were NOT observed.
  • F12628 - Specific phenotypes were NOT observed.
  • F16548 - Specific phenotypes were NOT observed.
  • F18748 - Specific phenotypes were NOT observed.
  • F20018 - Specific phenotypes were NOT observed.
  • F22534 - Specific phenotypes were NOT observed.
  • F23342 - Specific phenotypes were NOT observed.
  • F24810 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

13 mutant lines found