1. Home
  2. Full-length cDNAs
  3. RAFL06-81-B20

RAFL06-81-B20

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda03796)

full reading [+] show sequence

Nucleotide sequence: RAFL06-81-B20 - full reading 
ACCACTCAAA TCTCTTCACC TTGGCACCAT CTATAAATAT CCTCAAACAT 
TAGCCTCTTT AAGAAATCAA TTCCAACCTT TTAAAGATTA ATCTTGAAAA 
GTTTCTAATA AAAGGAAGAG AAGTGATCAG GTGTGGTGAC GAGTAGGATA 
TGAAATTCTT GTTGGAACTC GTCGTGCCTT GTTTTGGTTC ACAACAGTTC 
CAAGAATCCG CCGCAAGTAC TGCGGATGAT TCGGTTTCTG ACGAAACACA 
AACGCTGATG AAACAACGGA GGCGACGGAA ACGCGTTAGA GTGGCTGGTC 
AACCTGGACA AGTGGCAGAG TGGAGACCGT CTCTTAGCGT TATCTCCGAG 
AACAAGCCGG CGATAACGAA GATATCAGAA AAGAACGAAG AAAAGAAGAA 
AGTCCGTCGG AAAAGTGAAG GCAACGGCGG CGGAGACGCA TCATCACGGT 
CCGGTGGTGG TCATATTCGT TTCCGTAGTG ACGATTTCGG GAGAAATGCT 
TTCGAACCGG TGATTCCGGC ATTCTCGCCG ACTCCGTTCA TGTTTTGAGT 
TTAAGTTTCT GGTGAAGTTT ATGTGTATAA TATATTGATA AATATGTTAT 
TGTTAATGGA AAGATGTAGC ATTAATGTAT ATACTTCTTT GATTTTACTA 
CAAAAAAAAA AAAAAAA

Gene models with high sequence identity

  1. AT5G54585.1 [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT5G54585.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-81-B20 introduced

  • F03504_PLATE12 - Specific phenotypes were NOT observed.
  • F05707 - Specific phenotypes were NOT observed.
  • F15745 - Specific phenotypes were NOT observed.
  • F17015 - Specific phenotypes were NOT observed.
  • F20612 - Specific phenotypes were NOT observed.
  • F22634 - rosette leaf::increased size / rosette leaf::abnormal / cauline leaf::abnormal
  • F25727 - Specific phenotypes were NOT observed.
  • F27408 - Specific phenotypes were NOT observed.
  • F30028 - Specific phenotypes were NOT observed.
  • F30241 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

10 mutant lines found