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  3. RAFL06-81-O19

RAFL06-81-O19

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda03815)

full reading [+] show sequence

Nucleotide sequence: RAFL06-81-O19 - full reading 
TGACTTAAAA TTAAATAAAA AGATAGAAGA AAAATAGTGC TTTGAGAAGA 
AGAAAAAAAA CCGTTGCCCT AGAATTAAAA TCCACTTCTC AGTGTCATAG 
GCGTCGTCGG TTTGGGAATT TTATAAAGTT GGTCTCTTTT GAATTCATCA 
GTTTCGTCAT TCTCCTTCAA ATCTGGAAAC CAAAGCGAGT GTGTTTTGCT 
CTCTTGAATC GAATTTGTAA GCTCGTCGAT TTTGCTTCTT TCCGGGTCGG 
GTAATCAATT TGATTTGATT CTTCACTCTT CTACAGTGAG CAGAAAATGG 
AAGCTCTCTA CGCCAAGCTC TACGACAAAT ACACCAAACT CCAGAAGAAG 
AAATATTCCG AATACGATGA GATTAATAAG GAACAAGAAG AGAAATTCCT 
TACCTTTGTT TCAGCCTCAG AGGAGTTGAT GGAACATTTG AGAGGTGAAA 
ATCAGAGTTC TCTGGAGATG GTTGAGAAGT TGAGGAATGA AATCATTTCA 
ATCAGATCTG GCAGGGACGA CAAGTTTCTG GAGTGTCAAA AGCTTCTCAT 
GGAAGAAGAA CTAAAGAACA AATCACTTTC TGAAGAAGTT GTCAAGCTAA 
AAGAGCTGGT CCAAGAGGAA CATCCTCGCA ACTATGAAGA TCAAAGTGGA 
AAAAAACAAA AGAGAAAGAC TCCTGAAAGT GCTCGAGTTA CAACGAGAAG 
CATGATAAAA CGTAGCAGAC TGTCAGAAGA TTTGGTGGAA ACGGATATGG 
TATCACCTGA CATTAGCAAA CATCATAAAG CAAAGGAGCC TCTCTTGGTT 
TCTCAGCCAC AATGCTGCAG AACAACCTAC GATGGATCAA GTAGTTCTGC 
TAGTTGTACA TTTCAAGCTC TTGGCAAACA CTTGCTAGGA ATGAAATTAT 
CAACTAATAA TAAGGGCAAA CGCGCCTGCA TTGTAGCCTC ACACCCAACA 
ACCGGTTTAT CCTTCAGCCT AACTTTTATA AATAACCCAA ATGGTGAAGA 
ATCTGAGCTG CTTTACAAGC CTGCATCACT CGGAACATTT CAAAGAGTGG 
CACCGGAATG GATGAGAGAA GTTATAAAGT TCAGCACAAG TATGTGTCCC 
ATCTTCTTTG AAAGAGTCTC TCGAGTCATT AAGCTCAATT GTTGATCGGT 
ACCGTATGTA CATCTCCCTC CCCTTATCTT GTGTAGTCAT CTCTGATGGC 
TTCTTAGTGT GATGTTTCTC AATAGGTTTG AAAAGCTAGG GAAGTTATCA 
TTGTATCTAT AGAAATGTGT CTCTCTTTAA CTTTGGAATT AGTTTCAAAG 
ATAGTGTGTC CTTGTGATGA ATCATATTGT AACAAGATCT TGATTTATCC 
TTTGCTCTCG ATACCCTCTC CTCTTGTAGA CCTCATAAAT CTCTGATCTA 
TTGAGCATTT TACATGATTC AACGAAAAAA AAAAAAAAAA

Gene models with high sequence identity

  1. AT3G20070.1 [+] show detail - titan9
    E-value: 0; Score: 99.93

 

InterPro Scan Digest

Program Description E-value
Coil coiled-coil 0
Coil coiled-coil 0

See the detailed result >

AT3G20070.1

Model type
Protein coding
Short Description
titan9
Curator Summary
Encodes a plant-specific protein of unknown function. Mutant embryos contain at most four small cells. The endosperm nucleoli are enlarged. Gene is expressed in siliques based on EST information.
Computational Description
TITAN9 (TTN9); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy, endosperm development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; Has 250 Blast hits to 217 proteins in 63 species: Archae - 0; Bacteria - 52; Metazoa - 53; Fungi - 8; Plants - 43; Viruses - 2; Other Eukaryotes - 92 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-81-O19 introduced

  • F11507 - seed::increased size
  • F22239 - seed::increased size / seed::increased length
  • F23121 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

4 mutant lines found