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  3. RAFL06-82-A20

RAFL06-82-A20

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda07707)

full reading [+] show sequence

Nucleotide sequence: RAFL06-82-A20 - full reading 
AAGGACGCGA CAGTAGGAAA ATGGCTTTCG CAGCGACGCT CTTCGTTCCA 
CCTCCAGTAG CCGTCCGATC TCCGGCTAGA TTCCTTGGCC GTCTCTCAAT 
TCCTTGCCTG CTCCAAGTTC TTCCGACTAA TGGTGCAGCG AGTCCCCGGC 
AAGTGAAGAG GGCAATTGTA GCAAATGCTT CGCCGGGAAA CGGTGGCGTT 
AAGGCCGAGG AAGAAGACGG AGTTTCTCTG GGTACTATGA AGCTTCCCGT 
AGATACCGAT CTCGCTAGAT TCGAAACTCT TCTATTTCAG TGGGCGAATA 
GTCTTTGCCA AGGAGCCAAT CTACCTCTAC CTGTTCCTCT CAAGGTGGAC 
AGAATAAGCG GAGGAGCGAG GTTAGGATTC ATAGTGATGG AAGATGAAGG 
CAAGACCGAT GTTCCGGTTT ACATTGACTG TTTGGTTTTC CAAACAACAG 
AGAATGGTGT AGTGTTCCAA GCGACGCGTA ATGGGCGGAA GAAAGATAAA 
GCACCTCCGG GAGAAGAAAG AATCATGAGA AGTCTCTTAG GAGCCCTCAA 
AAAAGCTGTG GAGATTGCTC GAGTCACATA AACATTTGCC TCTTTCAGTT 
GAAACCGAAT TTCGAATATC TCTTTTGCTC TACGTCTTTC TAGTTTCTTA 
CTGCTACTAC TACTTATCTG AGACATGATC ACTGGTAAAT AATAAAGTTT 
TAAAGTTTGG GGCCAAAAAA AAAAAAAAAA

Gene models with high sequence identity

  1. AT2G36145.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT2G36145.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-82-A20 introduced

  • F18248 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

4 mutant lines found