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RAFL06-82-C19

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda03821)

full reading [+] show sequence

Nucleotide sequence: RAFL06-82-C19 - full reading 
AAGAAGCAGA ACACAAGAAA CGTGAGAAAC TTTGAGAAGA CCAAGAAGAA 
GAAGCAGAAG AAGAAGAAAA TGAAATTGGT TTGGTCTCCG GAAACAGCAT 
CAAAGGCTTA TATAGACACC GTTAAATCGT GTGAGAATCT TGAAACGCCG 
GACGCGGCGG AGCTAATAGC GGCGATGGCG GCGGGATGGA ACGTGAAGCT 
GATCGTGGAA ACTTGGTCAG AAGGAGACGC AATAGCTTCA AGTATTGGTT 
TAAACGTAGC AAGCAAACAC GCAAACGCTA AACACATATG TATAGTACAA 
AACTCAAGAT CAGAATCTGC TTATCTCCAA GCTATTCAAG AATCTTCATC 
TCCCTTGAAC TTTCCAGAGA CTATCGTCGC TGAAGAACCC GGAAAAGCGA 
TGAAGAAGCT ACAAGGAGTC GACTTCTTGG TCGTGGATTG GCGGAACAAA 
GAATTTGCAG CGGCTGCGTT GAAAAACGCT GCGTTTGGAA ACAGAGGAGC 
TGTTGTGGTT TGTAGAAACG GGTATTCGAG CTTGAGAAGG GTTTTAAGAG 
ACCGGAAAGT TGTTAGAACG GTGACTCTTC CGGTCACCGG AGGTATTGAG 
ATAGCTCATG TTGCGGCTAG GAACTCAGGG AAGAGTGGTA ACAATAAGAG 
AAGATGGATC ACACATGTTG ATCAGAGATC AGGAGAGGAA CATGTGTTTA 
GTATCTAGAA AGTCAGAGAC AAATAGTCAT AAGTGTTTAT TGGATCTTGT 
ATTTGTTGTG TTTGTACATA AGATGATTCC ATCAGATGCA ATTGTTATTG 
AAGAAAACAT GCTTGTCTTA TAAATGTGAT CTTTGTGTTG CAAAACAAAA 
AAAAAAAAAA AA

Gene models with high sequence identity

  1. AT1G12320.1 [+] show detail - Protein of unknown function (DUF1442)
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT1G12320.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1442)
Computational Description
Protein of unknown function (DUF1442); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1442 (InterPro:IPR009902); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1442) (TAIR:AT1G62840.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-82-C19 introduced

  • F13344 - Specific phenotypes were NOT observed.
  • F16141_77 - Specific phenotypes were NOT observed.
  • F21148 - Specific phenotypes were NOT observed.
  • F23925 - seed::increased length
  • F24208 - seed::increased size / seed::increased length
  • F24701 - Specific phenotypes were NOT observed.
  • F24840 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

8 mutant lines found