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RAFL06-82-H14

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda03833)

full reading [+] show sequence

Nucleotide sequence: RAFL06-82-H14 - full reading
AAAAAAAAAA ATCCCCAAAT TCGTTTCTCT TCGATTCAAA ATCTCTCCGC 
AAAAAATCCC CAAACACGAT CTCAACCTTG TGAGATTTCC AATCGAAATC
GAGAAGCCAT GGATAACAGC AGCAGCATCA ATTCCACCGC TTCCACGGCC
TCAAATCTGA GCACGGCTTC TCTGGAAAAG CTAGATCAAG CGGCGAGCTG
GGTCAGCACC ACCGTTATTT CCGCCTTCTT CGCCTCCCTC GAGCGTTGCT
CATGCGTTAA CCTATCTACC TCCGATGATG ACGATGAAGG CGAAGAATCT
CACAACCGTC CCCTTGCTCT CTCCGCCGCT CCTCACCCAG ACGACATCGT
TTAGATTCCC TTCGTTCGGT AAATCCTTCT TCGGTTTCGC CTTCTTTTTA
TTTTTGGTGA TCTAGAAATT GTATCAACTT TTGATTGTAC ATGCCAGATT
TGGTGTTTCT TCAAATGTTT ATGTGTAAAC CTGACTATTA TTACCTGCGT
TTGATTCGAT ATGGTTTGTA AAAAAAAAAA AAAAA

Gene models with high sequence identity

  1. AT4G10810.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT4G10810.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24026.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-82-H14 introduced

  • F06129 - stem::decreased thickness / whole plant::decreased height / seed::present in fewer numbers in organism
  • F15624 - Specific phenotypes were NOT observed.
  • F18551 - Specific phenotypes were NOT observed.
  • F23645 - Specific phenotypes were NOT observed.
  • F24839 - seed::increased size / seed::increased length
  • F24921 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

7 mutant lines found