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Full-length cDNAs
RAFL06-82-N08

RAFL06-82-N08

RIKEN Arabidopsis Full-length cDNAs

GGAGGAGAAG AAATCAACAA CTTAAGAATA AAGAATGTCG TATCCGACTT 
CGAACCAAAG CCCCATGCCA AAGTCACATA CACACACTTC TACATACCCT 
AAACACACAC ACTCGAATAC ATAAACTCTT TTCTATATAT AAACTTCTTA 
TAAGCCATTT GCTTAAACAA CTCTCAAGTA AAAAAAAAAA AATCAACAAT 
CTCTAAACTC TTCTCTGTTT TCTGATCTGT TCCAATGGAG ATTAATTGGA 
CAAGAGGACC AATCATCGGT CGAGGCTCTA CCGCCACTGT CTCTATAGCA 
ATCTCAAGCT CCGGTGAGCT CTTCGCCGTC AAATCTGCCG ACTTATCTTC 
TTCGTCCTTG TTGCAGAAAG AGCAATCAAT CTTGTCTACA TTGAGCTCTC 
CTCACATGGT CAAATACATA GGCACTGGTT TAACGCGCGA GAGCAACGGA 
TTGGTGTACA ATATACTGAT GGAATACGTT TCTGGTGGAA ATCTTCACGA 
TTTAATCAAA AATTCCGGCG GTAAGTTGCC GGAGCCGGAG ATAAGATCAT 
ACACTCGTCA GATTCTTAAC GGTTTGGTGT ATCTTCACGA GAGAGGGATT 
GTTCACTGCG ACTTGAAGAG CCATAACGTT CTGGTTGAGG AAAATGGCGT 
TTTGAAAATC GCCGACATGG GTTGTGCTAA ATCGGTTGAC AAGTCGGAAT 
TTTCCGGTAC ACCGGCGTTT ATGGCCCCAG AAGTTGCTCG TGGTGAAGAA 
CAGAGGTTTC CGGCTGATGT GTGGGCTTTG GGATGTACGA TGATCGAGAT 
GATGACTGGA TCAAGCCCTT GGCCGGAGTT AAACGACGTT GTTGCTGCAA 
TGTATAAGAT TGGATTTTCA GGCGAGTCGC CGGCGATTCC CGCGTGGATA 
TCGGATAAAG CTAAAGACTT TCTGAAGAAT TGTTTAAAGG AAGATCAAAA 
ACAGAGATGG ACTGTGGAAG AATTACTTAA ACATCCATTT CTTGATGACG 
ACGAAGAATC TCAGACAAGT GATTGTTTGA AGAACAAGAC TTCTTCTCCA 
AGCACTGTGT TGGATCAACG ATTTTGGGAT TCATGCGAAA GCTCCAAAAG 
TCACTTAGTT TCGATTGATC ATGAAGACCC TTTTGCTGAA TACTCGGAAT 
CTTTGGATTC ACCGGCTGAT CGGATCGAGA AACTCGCCGG AGATGAGTTT 
TCAAGCTTAC TTGATTGGGA TACGGAAGAC GATGGCGGAT GGATTCAAGT 
GAGAGGCGAG AAACATAAAG AAACCGAGAA ACGCGACGGC GACGAAGACG 
TGATTTGCGT TGAAGCAACG TCATCGTCGC AAACGATTGA AGAAGTTGAA 
GATTGGATTT CGAATCAAGA CAGCTTGTTC TCGGAATATT CCTCTGACGA 
CATCATTAAT AATTTCT

Gene models with high sequence identity

AT4G26890.1 [+] show detail - mitogen-activated protein kinase kinase kinase 16
E-value: 0; Score: 99.86

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Serine/threonine-protein kinase-like domain	3.8e-58
HMMSmart	Serine/threonine-protein kinase domain	9.6e-77
HMMSmart	Tyrosine-protein kinase, catalytic domain	3.2e-13
superfamily	Protein kinase-like domain	9.2e-73
Gene3D	no description	3.5e-55
HMMPanther	MITOGEN ACTIVATED PROTEIN KINASE-RELATED	9e-186
HMMPanther	MAPKK-RELATED SERINE/THREONINE PROTEIN KINASE	9e-186
ProfileScan	Protein kinase, catalytic domain	43.467
PatternScan	Protein kinase, ATP binding site	0
PatternScan	Serine/threonine-protein kinase, active site	0

See the detailed result >

AT4G26890.1

Model type: Protein coding
Short Description: mitogen-activated protein kinase kinase kinase 16
Curator Summary: member of MEKK subfamily
Computational Description: mitogen-activated protein kinase kinase kinase 16 (MAPKKK16); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 15 (TAIR:AT5G55090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

Mutant lines with RAFL06-82-N08 introduced

F20241 - rosette leaf::abnormal / stem::increased thickness
F24537 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

5 mutant lines found