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RAFL06-83-D05

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda03846)

full reading [+] show sequence

Nucleotide sequence: RAFL06-83-D05 - full reading 
GGTTTCAGTT CAGAGTAAGA GAGACAGAGA GAGAGATGAG TAGCTTCACG 
ATTCCATCTC CTTCCTCCTT CTCTCTTTCC AATTCATATA ATCAAACCTC 
TCCTCATTCC TTCACTCTCC GCAATTCTCG TTCCAATTTT GAGTTCCACC 
GGTTACGATT AGATGTGGAG TCTCGAAGAA GAAGCACTTC TTTACGGTCC 
AATTGCTCCA CCAAAGGTAC AGATTCAGGT GAAAATGAGA ACAAAAGTGT 
GTTAGATGCT TTCTTTTTGG GGAAAGCATT AGCTGAGGTT ATCAATGAGA 
GAATTGAGTC TACTGTTGGA GAAGTGTTGA GTACTATTGG AAAGTTTCAA 
GCTGAGCAAC AGAAACAAGT TCAAGAGATT CAGGAAGAGG TTCTTGAAAG 
AGCTAAGAAA GCTAAGGAAA GAGCAGCTCG AGAAACTATG GAGGAACAAG 
GACTTGTTGC TTCCAAACCA GTAGCCATTA CTCGAAATCC GGATGCTGTT 
GTTGTTGCCT CTGTAACTTC TACATCGACC GTTGAGAGCA AGACTATAAT 
GGTTGATGTA GAGGAAAGCT CGAGTTCCAG TGATGAAGAC TGAACGATGG 
TTTCAAGGGT TTAAGTTGAA GATTTGGTAA TAGCAGCAGA GACTTGTCTA 
AAAGGGTTAA GATATATGTA CTTGAAAAAA CGATGTAAAC AATGTAAGTT 
GATATAAATC AAGGTTAAAC CAGCGAAAAA AAAAAAAAAA A

Gene models with high sequence identity

  1. AT4G13200.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT4G13200.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 97 Blast hits to 97 proteins in 46 species: Archae - 0; Bacteria - 65; Metazoa - 2; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-83-D05 introduced

  • F08427 - seed::increased size / seed::increased length

Mutant lines with disrupted or induced

2 mutant lines found