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RAFL06-83-G17

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda03851)

full reading [+] show sequence

Nucleotide sequence: RAFL06-83-G17 - full reading 
GAGAGAAAGA GCGAGAGATG GGAGGGAAAG GAAAAAAGAG GAGAGAGAAA 
AATTACCTAG CTGCTCACGG CGGACCGGCG AGACTTCCGC CGCCGCCTGA 
TCGTTCGAAG CAAGATGATG TTCCTTCTAC GCTCCGTATC CTCATGAACT 
ACACTTCTCC TTCTCCCCAT GATTCTACTA AACAAGTCGT AGAGAAGAAG 
GAAAAGCTTA AGAAAGCTGA AGTAGTTGTT CCTGCAACGG AGAGTGATGG 
AGATGATAGT GTGGTGGAGA AGAAGAAGAA AAAGAGGAAG AGAAATCAAA 
TGACGGATCT TCGTTTTGAA AACGAACTTG CAGAGATTGA TGGTCGGTCT 
AAAAGGAAAG AACGCAAGAA GAAGTATTGG GAGGCCAAGA AGCAAAAGAA 
GAATAAAGGA AAGACTGAAG ATACCCTCCG TGAAAACTTC CCCAAGCATG 
AACAGATAAG ATTTGGTGAT GTTGTGCAAG CTCCACTTAA GTTGGCTGTT 
GTTCCGAAGG CAAGAAAGTC TACTCTAAGT GCTTCCCAGG AGAGGCTGCG 
ATTACAAGCC ATCGATGCTT ACAGATCACG CAAGGGATGG ACCGCTAGAC 
CAGGTGTTCC GATTCCTGCC GTGATGATGC AATAAGATAT GCCATGAATG 
TACTCTTTTT TTTTTTTGTT TACAGTGCGA CTTATCTGCT TTATTGTACT 
AGGTGACTGT AAAATTATAC AATATCGTGT CGTGTTCATC GGATTCTAAT 
ATATGTGATA GTTGAGACAA AAAAAAAAAA AAAA

Gene models with high sequence identity

  1. AT2G45520.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT2G45520.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 260 Blast hits to 238 proteins in 75 species: Archae - 0; Bacteria - 6; Metazoa - 94; Fungi - 40; Plants - 38; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-83-G17 introduced

  • F07904 - Specific phenotypes were NOT observed.
  • F17739 - Specific phenotypes were NOT observed.
  • F23639 - seed::increased size / seed::increased length
  • F26118 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

5 mutant lines found