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RAFL06-84-A02

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda03866)

full reading [+] show sequence

Nucleotide sequence: RAFL06-84-A02 - full reading 
ATAAACAAAA AGAATTTGAA CCAACAAAGC AAAACATGAA AGGCACATTC 
ACTAACTTGC TTGTGCTCCT TCTCATTGCA CTTGTTTGTG CCAATGTCGG 
TGCTAGGAAA CTTATCTCCG AAGATACCCA ATTCAAGGAT GAAAAATCTT 
TCCTCGGAGG CGGTGGCAGC GGTGATGGCT TAGGGCTTGG CCTTGGTGGA 
GGAGCTGGTC TTGGTGGGCT TGGGATTGGG GCTGGGATCG GCGCGGGAGC 
CGGACTAGGG TTAGGTGGAG GCGGTGGTGG ACTCGGAGGT GGTGGCGGTG 
GACTCCTCGG TGGAGGCGGC TTTGGGGGAG GAGCCGGTGG CGGACTCGGT 
GGCCTTCCTT GAACGTATTG ACAAGTGTGC GTGTGAGAGC TGATTCTCAG 
CTTATTACTA ATTAATTAAG TTACTTTCAT TCTCTTAATA AAATCTAGAG 
GATTTGAATT TCGGATTTCT TCAGCTTTAA TTTAAACTTC AATATTTGAA 
CCAAAAAGGT CTTGCTACTA GAGGTAATGC TCGTAATCGT ATTATGTGTA 
ACGCCGGTTC TGATATTCTT AAGTGCAAGT GTGGAACGTT TCTCTTTTAT 
TCACTATATA GCATTACTTT CTTTTTTCTT GTTTATATAT CGCTAAACAA 
AATGTATTTT TAATTTGTTT TGAGCAAAAA AAAAAAAAAA A

Gene models with high sequence identity

  1. AT1G11850.2 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
    E-value: 0; Score: 99.85

 

InterPro Scan Digest

Program Description E-value
FPrintScan PRICHEXTENSN 2.4e-13
FPrintScan PRICHEXTENSN 2.4e-13
FPrintScan PRICHEXTENSN 2.4e-13

See the detailed result >

AT1G11850.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; Has 84259 Blast hits to 16502 proteins in 1194 species: Archae - 107; Bacteria - 41190; Metazoa - 21798; Fungi - 3523; Plants - 7569; Viruses - 886; Other Eukaryotes - 9186 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-84-A02 introduced

  • F03831 - Specific phenotypes were NOT observed.
  • F09630 - rosette leaf::increased width / cauline leaf::decreased size / cauline leaf::present in fewer numbers in organism
  • F16916 - Specific phenotypes were NOT observed.
  • F22148 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

5 mutant lines found