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  3. RAFL06-84-F24

RAFL06-84-F24

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda03872)

full reading [+] show sequence

Nucleotide sequence: RAFL06-84-F24 - full reading 
ATTAGCAGAT TAAACAAATC TCAACATTCG AATTTTTAAA AATTCTTCAA 
AATCTCTTCT TCAATGGCGA CGGGAAAGAG TTACTACGCT AGGCCTAGCT 
ATCGATTTCT CGGCACCGAT CAGCCGTCTT ACTTCACCGC TTCCGATTCA 
GGTCTCGAAT TCGACGAATC CGATCTCTTC AATCCAATCC ACTCCGATTC 
ACCAGATTTT TGCCGTAAAA TCTCTTCATC AGTCAGATCC GGTAAAAAAT 
CGTCGAATCG TCCCTCCGCC GCTTCCTCCG CCGCAGCAGC GTCGTCGCTT 
CCTGTTAACG TGCCGGACTG GTCCAAGATT CTCCGCGGAG AATACCGCGA 
TAACCGACGG AGAAGCATCG AGGATAACGA CGACGATGAC GATGATAACG 
AAGACGGTGG CGATTGGTTA CCGCCGCATG AGTTTCTGGC GAAGACGAGA 
ATGGCTTCGT TCTCGGTTCA TGAAGGAGTA GGGAGGACAT TGAAAGGAAG 
AGATCTGAGT AGGGTTCGAA ATGCAATTTT TGAAAAATTT GGGTTCCAAG 
ATTAAATATT TGGAAACTTT TGGAGTTTTC CTTTAATTTT TGGCTTACTT 
CAATCATTTT CTCAAGTAAC TGTCAGAGAA GAGAGAGAGC ATGTAATATT 
TCTAGAAATG CCCTCCATTT ATCGTTATAT TCCGAAAATC TTACCCAAAA 
AAAAAAAAAA AA

Gene models with high sequence identity

  1. AT5G60680.1 [+] show detail - Protein of unknown function, DUF584
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT5G60680.1

Model type
Protein coding
Short Description
Protein of unknown function, DUF584
Computational Description
Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT3G45210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-84-F24 introduced

  • F04112 - Specific phenotypes were NOT observed.
  • F06222 - Specific phenotypes were NOT observed.
  • F06448 - Specific phenotypes were NOT observed.
  • F08917 - Specific phenotypes were NOT observed.
  • F22405 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

16 mutant lines found