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  3. RAFL06-86-K05

RAFL06-86-K05

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda03895)

full reading [+] show sequence

Nucleotide sequence: RAFL06-86-K05 - full reading 
AAGGAAGAGA AGAGTGTCCA TATCATAGAT TAAAAATCAT TCGTTAATCA 
AACCACAAAA TCTAACTTCC ACACACAAAA CACACATACA CAAGAAAATA 
AAAATAAAAA TGGAATTAGT TGAAGAGACC ATTCCAAAAG AAGGGAAAAA 
GATGGGAGAA AGAATTGTGG TCGACAAAGC TTATCTTTAC CAAGAAGACA 
AACCACTCAC CGTCTGCAAG ACTTCTCTCT TCTACACCGG CGATGGCTTC 
GCCGCCTATG ACTGCCGTGG TGATATCATC TTCAGGGTTG ATTCTTATGG 
ACCTGACACA AGAGATAACG ATGAGATTGT CCTCATGGAC GCGACCGGGA 
AGTGTCTCCT TACCGTTAAA CGAAAGAGAC CAACTCTACA CCAAAGATGG 
GAAGGTTTTC TCGGCGAGAG ATCGGAAGGT CAGAAACCGA TATTCAGCGT 
CCGTAGATCG TCGATAATCG GACGGTGTAC GATGGAAGTA GAAGTTTACG 
ACGGAACAGG AGAAGAGTAC ATTATCGATG GAGACTTCTC GCAACGAAGC 
TGTCTCATAT ACGACACGAA GAAATGTACT GTGGCTGAGA TCAAACGCAA 
AGTAGACGCG TCAACGAACG TGATGCTTGG TCGAGATGTG TTCACTCTAG 
AGATTAAACC GGGTTTTGAT GGCGCTTTCG CGATGGGTTT GGTCGTTGTG 
CTTGACCAGA TCAACGGTGA TGATCCAGTT GAGATTGGTG ATGAACAGGT 
ACACCCTTTT GTAGAGGATT AGTGTCGGTC TCTCTCTCAC CTCTCTCAGC 
GGTCTTCACG TTAACATATC GAATCTAATC TTTAGTTTTT CAATCTTTGG 
ATTTGGACCA TATGGGATTA TGGAGATCTG TTTGTATCAT TCTGTGTTAA 
GTCATTTAAG TTGCTACGTT AGAAAAAAAA AAAAAAAA

Gene models with high sequence identity

  1. AT3G15810.1 [+] show detail - Protein of unknown function (DUF567)
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT3G15810.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF567)
Computational Description
Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT1G80120.1); Has 436 Blast hits to 435 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 7; Plants - 429; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-86-K05 introduced

  • F06619 - Specific phenotypes were NOT observed.
  • F07141 - Specific phenotypes were NOT observed.
  • F16522 - Specific phenotypes were NOT observed.
  • F19834 - Specific phenotypes were NOT observed.
  • F21929 - Specific phenotypes were NOT observed.
  • F23317 - Specific phenotypes were NOT observed.
  • F24506 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

8 mutant lines found