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  3. RAFL06-89-J21

RAFL06-89-J21

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda12272)

full reading [+] show sequence

Nucleotide sequence: RAFL06-89-J21 - full reading 
ATTTAACTTT TGCCTCTCTT TTCTCCTCGT GAAGGAAAAT TCTTTAGTCA 
TTTTTTCTCT CCTCGAGAAT TACGCAAACA CAACAAAAAC CCAGACATTG 
AAAAGTAAAA AACAAAAACA GAGAAAGTGG GAGATAGAAG ATGACGGCAT 
CAGGAGGAGG ATCAACGGCG GCGACGGGGA GGATGCCGAC GTGGAAGGAA 
AGAGAGAACA ACAAGAAGAG AGAAAGAAGA AGAAGAGCAA TAGCAGCTAA 
AATCTTCACC GGACTTAGAT CTCAAGGCAA TTATAAACTT CCTAAACACT 
GTGACAACAA TGAAGTCCTC AAAGCTCTTT GTCTTGAAGC TGGTTGGATC 
GTTCATGAAG ATGGCACCAC TTATCGAAAG GGTTCTCGAC CAACAGAAAC 
AACAGTGCCG TGTTCGTCAA TCCAACTTAG TCCACAATCA TCGGCCTTTC 
AAAGCCCAAT TCCTTCGTAT CAAGCTAGCC CTTCATCGTC ATCTTACCCA 
AGTCCGACCC GGTTTGACCC GAATCAATCC TCGACTTATC TCATTCCCTA 
TCTCCAAAAC CTAGCTTCGT CTGGAAACCT CGCTCCTCTA CGAATTTCCA 
ATAGTGCCCC TGTTACACCG CCGATTTCTT CACCTAGAAG ATCAAATCCG 
AGACTTCCGA GATGGCAAAG CAGTAATTTC CCAGTCTCAG CTCCGTCAAG 
CCCAACACGG CGTCTCCATC ACTACACATC GATTCCAGAA TGCGATGAAT 
CGGATGTTTC GACGGTTGAT TCTTGTCGAT GGGGAAATTT CCAATCGGTT 
AACGTTTCTC AGACATGTCC TCCGTCGCCG ACATTTAACC TGGTCGGAAA 
AAGCGTTAGC TCCGTCGGAG TAGATGTGTC GGTGAAGCCG TGGGAAGGTG 
AGAAGATTCA CGATGTTGGT ATCGATGACT TGGAGCTGAC GCTAGGTCAC 
AACACCAAAG GACGCGGCTA GGTTAATATC GTGGTTTAAC TATTTAGTCG 
GGTCCGGTAC GAGATTGGTT CCGGTTAAAT CGTAGCTAAT AGATTGGTCT 
TTGTCTTCAT GACTATTTTG TACAGTCATT ATCATTTATC AATGCTTCAT 
TTCACAAAAT CTAGTATTTT TTTTTTTATA TGTAATGGTG GATAATGAAA 
AATGCAAGTG TGTGAAAGTT AGAGTAACCA CTCCCCATGT GATGATGGGG 
TCATGTGAAT GTGATCTCTA ACCACGCATG ATTTTTCAAT GTGCCTATCT 
ATATAAACAC ACCATTTTTA GTG

Gene models with high sequence identity

  1. AT3G50750.1 [+] show detail - BES1/BZR1 homolog 1
    E-value: 0; Score: 99.92

 

InterPro Scan Digest

See the detailed result >

AT3G50750.1

Model type
Protein coding
Short Description
BES1/BZR1 homolog 1
Computational Description
BES1/BZR1 homolog 1 (BEH1); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: Brassinosteroid signalling positive regulator (BZR1) family protein (TAIR:AT1G75080.2); Has 1801 Blast hits to 330 proteins in 47 species: Archae - 0; Bacteria - 4; Metazoa - 13; Fungi - 27; Plants - 263; Viruses - 0; Other Eukaryotes - 1494 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL06-89-J21 introduced

  • F17112 - Specific phenotypes were NOT observed.
  • F18136 - seed::increased size / seed::increased length
  • F21840 - Specific phenotypes were NOT observed.
  • F25441 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

6 mutant lines found